RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ERP27Q96DN0 273 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 SENP7Q9BQF6 1050 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 DDX23Q9BUQ8 820 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 IGSF9BQ9UPX0 1349 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 A0A0G2JND7 137 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 TISP43B9A030 160 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 VCAM1P19320 739 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 ACOT2P49753 483 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 HIF1AQ16665 826 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 CFAP157Q5JU67 520 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 CASC4Q6P4E1 433 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 KCNV2Q8TDN2 545 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 PIK3R5Q8WYR1 880 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 DHX38Q92620 1227 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 LPAR1Q92633 364 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 C17orf75Q9HAS0 396 aa12.36□□□□□ -0.43
UBE2D3-209ENST00000394804 COL5A3P25940 1745 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 H0Y3Z8 333 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 PSTPIP1O43586 416 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 ATP6V1G2O95670 118 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 NPTX2P47972 431 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 CLEC16AQ2KHT3 1053 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 DARS2Q6PI48 645 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 C4orf33Q8N1A6 199 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 PDCD7Q8N8D1 485 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 POP1Q99575 1024 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 DCDC2CA8MYV0 355 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 ZC3H11AO75152 810 aaKnown RBP eCLIP12.35□□□□□ -0.433e-19■□□□□ 8.5
UBE2D3-209ENST00000394804 FDX1P10109 184 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 MMP13P45452 471 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 PPATQ06203 517 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 AUHQ13825 339 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 AGGF1Q8N302 714 aaeCLIP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 PPCSQ9HAB8 311 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 BATF3Q9NR55 127 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 TOPORSQ9NS56 1045 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 DCTN4Q9UJW0 460 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 STXBP5LQ9Y2K9 1186 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 CACNA1SQ13698 1873 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 LMNAP02545 664 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 KRT7P08729 469 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 ESRRAP11474 423 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 SEPT14Q6ZU15 432 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 C4orf19Q8IY42 314 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 RTKN2Q8IZC4 609 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 CFAP61Q8NHU2 1237 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 ATP2A3Q93084 1043 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 MAGEB18Q96M61 343 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 AJAP1Q9UKB5 411 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 SYNPO2Q9UMS6 1093 aa12.35□□□□□ -0.43
UBE2D3-209ENST00000394804 PROSCO94903 275 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 RPS6P62753 249 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 TAP1Q03518 808 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 SHROOM1Q2M3G4 852 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 C2CD6Q53TS8 623 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 ZC3H3Q8IXZ2 948 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 FAM71AQ8IYT1 594 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 MOV10L1Q9BXT6 1211 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 NR2E1Q9Y466 385 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 MAD1L1Q9Y6D9 718 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 HAUS5O94927 633 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 DNAJC3Q13217 504 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 CNGA2Q16280 664 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 CCDC14Q49A88 953 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 DACT2Q5SW24 774 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 SNRNP48Q6IEG0 339 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 RDM1Q8NG50 284 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 PARD3BQ8TEW8 1205 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 TTC17Q96AE7 1141 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 MRIQ9BWK5 157 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 JPH1Q9HDC5 661 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 PSMC3IPQ9P2W1 217 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 SLC9A2Q9UBY0 812 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 INO80B-WBP1J3KQ70 363 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 EXTL3O43909 919 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 STK10O94804 968 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 CHRNA5P30532 468 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 CYP24A1Q07973 514 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 SPIRE1Q08AE8 756 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 CCNG2Q16589 344 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 FEZF2Q8TBJ5 459 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 NSMCE1Q8WV22 266 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 TAAR1Q96RJ0 339 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 INO80BQ9C086 356 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 DCLK3Q9C098 648 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 AGO4Q9HCK5 861 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 RREB1Q92766 1687 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 UBR3Q6ZT12 1888 aa12.34□□□□□ -0.43
UBE2D3-209ENST00000394804 SNX3O60493 162 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 PAEPP09466 180 aa12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 SARNPP82979 210 aaKnown RBP12.33□□□□□ -0.43
UBE2D3-209ENST00000394804 BAATQ14032 418 aaPredicted RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms