RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 ZNF446Q9NWS9 450 aa23.74■■□□□ 1.39
HMGA2-203ENST00000393578 EHD2Q9NZN4 543 aa23.74■■□□□ 1.39
HMGA2-203ENST00000393578 LACTBP83111 547 aaPredicted RBP23.73■■□□□ 1.39
HMGA2-203ENST00000393578 HIC1Q14526 733 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 SLC10A6Q3KNW5 377 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 DCAF4L1Q3SXM0 396 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 JADE1Q6IE81 842 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 WDR93Q6P2C0 686 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 RUFY4Q6ZNE9 571 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 PAXIP1Q6ZW49 1069 aaPredicted RBP23.73■■□□□ 1.39
HMGA2-203ENST00000393578 UBE2Q2Q8WVN8 375 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 ZNF653Q96CK0 615 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 ACAP3Q96P50 834 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 SELENOOQ9BVL4 669 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 SMARCAL1Q9NZC9 954 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 GINS2Q9Y248 185 aa23.73■■□□□ 1.39
HMGA2-203ENST00000393578 CYP1A1P04798 512 aaPredicted RBP23.72■■□□□ 1.39
HMGA2-203ENST00000393578 PURAQ00577 322 aaKnown RBP23.72■■□□□ 1.39
HMGA2-203ENST00000393578 MFSD14CQ5VZR4 134 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 CCDC70Q6NSX1 233 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 TRPV1Q8NER1 839 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 PPP1R13LQ8WUF5 828 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 FAXDC2Q96IV6 333 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 ARHGAP39Q9C0H5 1083 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 UVRAGQ9P2Y5 699 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 KPNA6O60684 536 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 TBC1D8O95759 1140 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 DARSP14868 501 aaKnown RBP23.72■■□□□ 1.39
HMGA2-203ENST00000393578 FGFR4P22455 802 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 CC2D1AQ6P1N0 951 aaPredicted RBP23.72■■□□□ 1.39
HMGA2-203ENST00000393578 CATSPER4Q7RTX7 472 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 C1orf127Q8N9H9 656 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 HNRNPLLQ8WVV9 542 aaKnown RBP23.72■■□□□ 1.39
HMGA2-203ENST00000393578 ARFGAP3Q9NP61 516 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 CISHQ9NSE2 258 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 SIX4Q9UIU6 781 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 MROH7Q68CQ1 1323 aa23.72■■□□□ 1.39
HMGA2-203ENST00000393578 GNAT1P11488 350 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 CYBAP13498 195 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 MCM3P25205 808 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 HOXA11P31270 313 aaPredicted RBP23.71■■□□□ 1.39
HMGA2-203ENST00000393578 GRM5P41594 1212 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 CENPCQ03188 943 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 PTPROQ16827 1216 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 CYP4F22Q6NT55 531 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 ACTRT1Q8TDG2 376 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 DNAJB3Q8WWF6 145 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 TRIM11Q96F44 468 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 OSMRQ99650 979 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 CDHR5Q9HBB8 845 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 C2CD2Q9Y426 696 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 C17orf102A2RUQ5 167 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 TREHO43280 583 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 ATMINO43313 823 aaPredicted RBP23.71■■□□□ 1.39
HMGA2-203ENST00000393578 KRT19P08727 400 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 MYBL1P10243 752 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 HOXC8P31273 242 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 ASPAP45381 313 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 YWHAEP62258 255 aaKnown RBP23.71■■□□□ 1.39
HMGA2-203ENST00000393578 PPP1R2P3Q6NXS1 205 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 SLC27A1Q6PCB7 646 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 NT5DC4Q86YG4 428 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 CD302Q8IX05 232 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 NUP85Q9BW27 656 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 ALG6Q9Y672 507 aa23.71■■□□□ 1.39
HMGA2-203ENST00000393578 ZRANB2O95218 330 aaKnown RBP eCLIP23.7■■□□□ 1.38
HMGA2-203ENST00000393578 EIF4BP23588 611 aaKnown RBP23.7■■□□□ 1.38
HMGA2-203ENST00000393578 NSFP46459 744 aaKnown RBP23.7■■□□□ 1.38
HMGA2-203ENST00000393578 VSNL1P62760 191 aa23.7■■□□□ 1.38
HMGA2-203ENST00000393578 TMEM132DQ14C87 1099 aa23.7■■□□□ 1.38
HMGA2-203ENST00000393578 MCOLN2Q8IZK6 566 aa23.7■■□□□ 1.38
HMGA2-203ENST00000393578 C7orf31Q8N865 590 aa23.7■■□□□ 1.38
HMGA2-203ENST00000393578 USP38Q8NB14 1042 aa23.7■■□□□ 1.38
HMGA2-203ENST00000393578 ZNF564Q8TBZ8 553 aaPredicted RBP23.7■■□□□ 1.38
HMGA2-203ENST00000393578 TRIB2Q92519 343 aa23.7■■□□□ 1.38
HMGA2-203ENST00000393578 CYFIP2Q96F07 1278 aa23.7■■□□□ 1.38
HMGA2-203ENST00000393578 RBM12Q9NTZ6 932 aaKnown RBP23.7■■□□□ 1.38
HMGA2-203ENST00000393578 RNF216Q9NWF9 866 aaPredicted RBP23.7■■□□□ 1.38
HMGA2-203ENST00000393578 GABRQQ9UN88 632 aa23.7■■□□□ 1.38
HMGA2-203ENST00000393578 THAP12O43422 761 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 ERLIN1O75477 346 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 C6orf222P0C671 652 aaPredicted RBP23.69■■□□□ 1.38
HMGA2-203ENST00000393578 ATICP31939 592 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 FLT3LGP49771 235 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 GJA9P57773 515 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 NOGQ13253 232 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 NAA35Q5VZE5 725 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 NOTUMQ6P988 496 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 CXorf38Q8TB03 319 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 CPA5Q8WXQ8 436 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 RPS6KC1Q96S38 1066 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 CCDC94Q9BW85 323 aaPredicted RBP23.69■■□□□ 1.38
HMGA2-203ENST00000393578 AVENQ9NQS1 362 aaPredicted RBP23.69■■□□□ 1.38
HMGA2-203ENST00000393578 CNOT8Q9UFF9 292 aaKnown RBP23.69■■□□□ 1.38
HMGA2-203ENST00000393578 CEP104O60308 925 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 ITGB3P05106 788 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 CD58P19256 250 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 ZNF667Q5HYK9 610 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 NME8Q8N427 588 aa23.69■■□□□ 1.38
HMGA2-203ENST00000393578 ZNF606Q8WXB4 792 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms