RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ZNF667Q5HYK9 610 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 TWF2Q6IBS0 349 aaKnown RBP9.26□□□□□ -0.93
TDP1-203ENST00000393454 FAM228AQ86W67 206 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 CD302Q8IX05 232 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 RBBP8NLQ8NC74 664 aaPredicted RBP9.26□□□□□ -0.93
TDP1-203ENST00000393454 MNS1Q8NEH6 495 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 OLIG1Q8TAK6 271 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 CTNNBL1Q8WYA6 563 aaPredicted RBP9.26□□□□□ -0.93
TDP1-203ENST00000393454 WNT8BQ93098 351 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 PCDHB18PQ96TA0 734 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 NXF3Q9H4D5 531 aaKnown RBP9.26□□□□□ -0.93
TDP1-203ENST00000393454 DPP3Q9NY33 737 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 INTUQ9ULD6 942 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 AGAP1Q9UPQ3 857 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 MRFAP1Q9Y605 127 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 PTCH2Q9Y6C5 1203 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 GRIN2DO15399 1336 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 TRIP11Q15643 1979 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 CENPFP49454 3210 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 THSD7BQ9C0I4 1608 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 RTN2O75298 545 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 PALMO75781 387 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 RECQL4O94761 1208 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 MYCP01106 439 aaPredicted RBP9.25□□□□□ -0.93
TDP1-203ENST00000393454 FTLP02792 175 aaPredicted RBP9.25□□□□□ -0.93
TDP1-203ENST00000393454 ACO1P21399 889 aaKnown RBP9.25□□□□□ -0.93
TDP1-203ENST00000393454 FMO1Q01740 532 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 WDR72Q3MJ13 1102 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 SESTD1Q86VW0 696 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 TSC1Q92574 1164 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 TAF4BQ92750 862 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 GLT1D1Q96MS3 346 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 CARD6Q9BX69 1037 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 PLEKHA5Q9HAU0 1116 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 TRMT13Q9NUP7 481 aaKnown RBP9.25□□□□□ -0.93
TDP1-203ENST00000393454 RNF19AQ9NV58 838 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 KLK14Q9P0G3 267 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 SIX4Q9UIU6 781 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 CDC23Q9UJX2 597 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 POLIQ9UNA4 740 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 C2CD2Q9Y426 696 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 JRKLQ9Y4A0 524 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 PCDHB2Q9Y5E7 798 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 ANKRD62A6NC57 917 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 BTNL10A8MVZ5 291 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 CHRNA1P02708 482 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 TMEM253P0C7T8 217 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 GNA15P30679 374 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 YWHAEP62258 255 aaKnown RBP9.25□□□□□ -0.93
TDP1-203ENST00000393454 RBP5P82980 135 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 TUBB2AQ13885 445 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 ZNF394Q53GI3 561 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 GLRA4Q5JXX5 417 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 SH3TC2Q8TF17 1288 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 HPDLQ96IR7 371 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 SNX27Q96L92 541 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 TUBB2BQ9BVA1 445 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 XYLT2Q9H1B5 865 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 CXCL16Q9H2A7 254 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 CISHQ9NSE2 258 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 ITGA11Q9UKX5 1188 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 ST3GAL5Q9UNP4 418 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 SAR1BQ9Y6B6 198 aa9.25□□□□□ -0.93
TDP1-203ENST00000393454 ANO9A1A5B4 782 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 MOXD2PA6NHM9 499 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 THAP12O43422 761 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 NCK2O43639 380 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 RPLP2P05387 115 aaKnown RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 GZMAP12544 262 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 P4HA1P13674 534 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 ATICP31939 592 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 GTF2F1P35269 517 aaKnown RBP eCLIP9.24□□□□□ -0.93
TDP1-203ENST00000393454 ASPAP45381 313 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 RAP1GAPP47736 663 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 UBXN11Q5T124 520 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 LHX8Q68G74 356 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 ZNF677Q86XU0 584 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 ARRDC4Q8NCT1 418 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 BEST2Q8NFU1 509 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 DDX1Q92499 740 aaKnown RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 SENP6Q9GZR1 1112 aaPredicted RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 THAP2Q9H0W7 228 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 RNF39Q9H2S5 420 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.24□□□□□ -0.93
TDP1-203ENST00000393454 IPPQ9Y573 584 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 V9GYY5 206 aaPredicted RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 ATP8B3O60423 1300 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 A0A0A6YYK5 440 aaPredicted RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 GPR182O15218 404 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 SRGAP2O75044 1071 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 FTCDO95954 541 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 IBSPP21815 317 aaPredicted RBP9.24□□□□□ -0.93
TDP1-203ENST00000393454 DNA2P51530 1060 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 CDH8P55286 799 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 GPC5P78333 572 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 MYO1EQ12965 1108 aa9.24□□□□□ -0.93
TDP1-203ENST00000393454 PTK7Q13308 1070 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms