RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 ADPGKQ9BRR6 497 aa16.48■□□□□ 0.23
RAB3IP-204ENST00000378815 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
RAB3IP-204ENST00000378815 CDHR5Q9HBB8 845 aa16.48■□□□□ 0.23
RAB3IP-204ENST00000378815 SIX4Q9UIU6 781 aa16.48■□□□□ 0.23
RAB3IP-204ENST00000378815 AMFRQ9UKV5 643 aa16.48■□□□□ 0.23
RAB3IP-204ENST00000378815 ANK1P16157 1881 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 KAT6AQ92794 2004 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 CCDC151A5D8V7 595 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 CLSTN1O94985 981 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 CYP1A1P04798 512 aaPredicted RBP16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 TUBBP07437 444 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 BRD3Q15059 726 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 PCBP1Q15365 356 aaKnown RBP eCLIP16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 C11orf63Q6NUN7 778 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 C1orf127Q8N9H9 656 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 CXorf38Q8TB03 319 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 TRIB2Q92519 343 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 GABRQQ9UN88 632 aa16.47■□□□□ 0.23
RAB3IP-204ENST00000378815 DARSP14868 501 aaKnown RBP16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 GNA15P30679 374 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 ASPAP45381 313 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 PTPROQ16827 1216 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 DCAF4L1Q3SXM0 396 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 ZNF653Q96CK0 615 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 GINS2Q9Y248 185 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 TARSL2A2RTX5 802 aaKnown RBP16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 TREHO43280 583 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 ATMINO43313 823 aaPredicted RBP16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 RRP9O43818 475 aaKnown RBP16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 GRM5P41594 1212 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 CENPCQ03188 943 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 MFSD14CQ5VZR4 134 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 WDR93Q6P2C0 686 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 TMCO3Q6UWJ1 677 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 TRIM72Q6ZMU5 477 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 DNAJB3Q8WWF6 145 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 ACAP3Q96P50 834 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 OSMRQ99650 979 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 CISHQ9NSE2 258 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 MROH7Q68CQ1 1323 aa16.46■□□□□ 0.23
RAB3IP-204ENST00000378815 MGAMO43451 1857 aa16.46■□□□□ 0.22
RAB3IP-204ENST00000378815 MYADML2A6NDP7 307 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 ZRANB2O95218 330 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 FLT3LGP49771 235 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 GJA9P57773 515 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 ZNF200P98182 395 aaPredicted RBP16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 CC2D1AQ6P1N0 951 aaPredicted RBP16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 CATSPER4Q7RTX7 472 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 FAXDC2Q96IV6 333 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 UVRAGQ9P2Y5 699 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 CHORDC1Q9UHD1 332 aaPredicted RBP16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 C2CD2Q9Y426 696 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 C17orf102A2RUQ5 167 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 KPNA6O60684 536 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 VSNL1P62760 191 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 NOGQ13253 232 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 MCOLN2Q8IZK6 566 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 ACTRT1Q8TDG2 376 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 HNRNPLLQ8WVV9 542 aaKnown RBP16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 CYFIP2Q96F07 1278 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 NUP85Q9BW27 656 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 ALG6Q9Y672 507 aa16.45■□□□□ 0.22
RAB3IP-204ENST00000378815 DDX3YO15523 660 aaKnown RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 CFHP08603 1231 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 KRT19P08727 400 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 EIF4BP23588 611 aaKnown RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 NAA35Q5VZE5 725 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 SLC27A1Q6PCB7 646 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 APBB1IPQ7Z5R6 666 aaPredicted RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 NT5DC4Q86YG4 428 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 CPA5Q8WXQ8 436 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 SELENOOQ9BVL4 669 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 CNOT8Q9UFF9 292 aaKnown RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 THAP12O43422 761 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 NPTXRO95502 500 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 ITGB3P05106 788 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 WEE2P0C1S8 567 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 C6orf222P0C671 652 aaPredicted RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 MYBL1P10243 752 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 GNAT1P11488 350 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 CD58P19256 250 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 NSFP46459 744 aaKnown RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 TMEM132DQ14C87 1099 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 NOTUMQ6P988 496 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 CD302Q8IX05 232 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 TMEM130Q8N3G9 435 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 RASGEF1CQ8N431 466 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 C7orf31Q8N865 590 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 USP38Q8NB14 1042 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 ZNF564Q8TBZ8 553 aaPredicted RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 ZNF606Q8WXB4 792 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 TRIM11Q96F44 468 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 BCO2Q9BYV7 579 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 UPF3AQ9H1J1 476 aaKnown RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 VRTNQ9H8Y1 702 aa16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 AVENQ9NQS1 362 aaPredicted RBP16.44■□□□□ 0.22
RAB3IP-204ENST00000378815 ATICP31939 592 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms