RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MTDHQ86UE4 582 aaKnown RBP17.52■□□□□ 0.39
TRIM39-201ENST00000376656 CCDC89Q8N998 374 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 XXYLT1Q8NBI6 393 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 ZNF333Q96JL9 665 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 LXNQ9BS40 222 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 DCLRE1BQ9H816 532 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 NPHS2Q9NP85 383 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 UBN1Q9NPG3 1134 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 KCNG1Q9UIX4 513 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 ASB3Q9Y575 518 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 ABHD2P08910 425 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 ADSSP30520 456 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 CACNB3P54284 484 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 CWF19L1Q69YN2 538 aaKnown RBP17.51■□□□□ 0.39
TRIM39-201ENST00000376656 FAM136AQ96C01 138 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 SMC6Q96SB8 1091 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 ETAA1Q9NY74 926 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 A0A1W2PPM1 405 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 NVLO15381 856 aaKnown RBP17.51■□□□□ 0.39
TRIM39-201ENST00000376656 NDUFB10O96000 172 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 CENPCQ03188 943 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 CERKLQ49MI3 558 aaPredicted RBP17.51■□□□□ 0.39
TRIM39-201ENST00000376656 PLEKHG4Q58EX7 1191 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 DSTYKQ6XUX3 929 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 ANKS1BQ7Z6G8 1248 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 ZCCHC9Q8N567 271 aaKnown RBP17.51■□□□□ 0.39
TRIM39-201ENST00000376656 GLIS1Q8NBF1 620 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 HELQQ8TDG4 1101 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 FBXO41Q8TF61 875 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 CFAP57Q96MR6 1250 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 TLE6Q9H808 572 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 CYLDQ9NQC7 956 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 C2CD2Q9Y426 696 aa17.51■□□□□ 0.39
TRIM39-201ENST00000376656 KLRC2P26717 231 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 TCP10Q12799 353 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 CLEC16AQ2KHT3 1053 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 RNF220Q5VTB9 566 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 C4orf50Q6ZRC1 276 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 BBOF1Q8ND07 529 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 SH3TC2Q8TF17 1288 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 KCND2Q9NZV8 630 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRIM39-201ENST00000376656 CFBP00751 764 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 FDX1P10109 184 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 NR1H3Q13133 447 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 CTC1Q2NKJ3 1217 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 PADI6Q6TGC4 694 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 GSTA5Q7RTV2 222 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 CCDC127Q96BQ5 260 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 CADM1Q9BY67 442 aaKnown RBP17.5■□□□□ 0.39
TRIM39-201ENST00000376656 SIGLEC16A6NMB1 481 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 CCNG2Q16589 344 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 SLC45A4Q5BKX6 768 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 HHATQ5VTY9 493 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 CLNKQ7Z7G1 428 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 PHC3Q8NDX5 983 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 ZNF75CPQ92670 426 aaPredicted RBP17.5■□□□□ 0.39
TRIM39-201ENST00000376656 TMEM206Q9H813 350 aa17.5■□□□□ 0.39
TRIM39-201ENST00000376656 SMG5Q9UPR3 1016 aaKnown RBP17.5■□□□□ 0.39
TRIM39-201ENST00000376656 ARP10275 920 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 LVRNQ6Q4G3 990 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 NRG4Q8WWG1 115 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 ACCSQ96QU6 501 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 GDF11O95390 407 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 ZSCAN5DPP0CG00 497 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 PLS3P13797 630 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 GJC1P36383 396 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 CCDC6Q16204 474 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 CBWD2Q8IUF1 395 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 KANSL3Q9P2N6 904 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 STOML1Q9UBI4 398 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 LNPEPQ9UIQ6 1025 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 DCTN4Q9UJW0 460 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 DDX39AO00148 427 aaKnown RBP17.49■□□□□ 0.39
TRIM39-201ENST00000376656 C2CD2LO14523 706 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 TYROBPO43914 113 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 VHLP40337 213 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 RCN1Q15293 331 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 MAPK6Q16659 721 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 MFN1Q8IWA4 741 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 CPA5Q8WXQ8 436 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 MAK16Q9BXY0 300 aaKnown RBP17.49■□□□□ 0.39
TRIM39-201ENST00000376656 FHDC1Q9C0D6 1143 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-201ENST00000376656 METTL5Q9NRN9 209 aaKnown RBP17.49■□□□□ 0.39
TRIM39-201ENST00000376656 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
TRIM39-201ENST00000376656 CPSF2Q9P2I0 782 aaKnown RBP17.49■□□□□ 0.39
TRIM39-201ENST00000376656 STRCQ7RTU9 1775 aa17.49■□□□□ 0.39
TRIM39-201ENST00000376656 WDR91A4D1P6 747 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 ECE2O60344 883 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 KRT36O76013 467 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
TRIM39-201ENST00000376656 SLC18A1P54219 525 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 OVGP1Q12889 678 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 PPP1R15BQ5SWA1 713 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 SNX30Q5VWJ9 437 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 OR52E8Q6IFG1 317 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 APOBEC3HQ6NTF7 200 aaKnown RBP17.48■□□□□ 0.39
TRIM39-201ENST00000376656 IRGCQ6NXR0 463 aa17.48■□□□□ 0.39
TRIM39-201ENST00000376656 TDRPQ86YL5 185 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms