RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 HNRNPDLO14979 420 aaKnown RBP16.07■□□□□ 0.16
HDAC6-204ENST00000376643 TBC1D4O60343 1298 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 TBCAO75347 108 aaKnown RBP16.07■□□□□ 0.16
HDAC6-204ENST00000376643 FAM13AO94988 1023 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 LMNAP02545 664 aaKnown RBP16.07■□□□□ 0.16
HDAC6-204ENST00000376643 KRT18P05783 430 aaKnown RBP16.07■□□□□ 0.16
HDAC6-204ENST00000376643 CPB1P15086 417 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 LRPAP1P30533 357 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 LONP1P36776 959 aaKnown RBP16.07■□□□□ 0.16
HDAC6-204ENST00000376643 NCKAP1LP55160 1127 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 ARPP19P56211 112 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 RAD51AP2Q09MP3 1159 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 SLC10A6Q3KNW5 377 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 SLC44A4Q53GD3 710 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 SPECC1Q5M775 1068 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 HAUS6Q7Z4H7 955 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 ADSSL1Q8N142 457 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 DDX12PQ92771 950 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 TBC1D32Q96NH3 1257 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 PNMA5Q96PV4 448 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 GPR88Q9GZN0 384 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 PARVGQ9HBI0 331 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 ZFP14Q9HCL3 533 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 HCFC1R1Q9NWW0 138 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 INSL5Q9Y5Q6 135 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 VWA8A3KMH1 1905 aa16.07■□□□□ 0.16
HDAC6-204ENST00000376643 OR6C75A6NL08 312 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 DCNP07585 359 aaKnown RBP16.06■□□□□ 0.16
HDAC6-204ENST00000376643 SNW1Q13573 536 aaKnown RBP16.06■□□□□ 0.16
HDAC6-204ENST00000376643 ZNF528Q3MIS6 628 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 ZBTB41Q5SVQ8 909 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 LARP1BQ659C4 914 aaKnown RBP16.06■□□□□ 0.16
HDAC6-204ENST00000376643 C1orf228Q6PIY5 440 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 ZNF852Q6ZMS4 543 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 E2F7Q96AV8 911 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 KXD1Q9BQD3 176 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 CORO1BQ9BR76 489 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 IER2Q9BTL4 223 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 DDX23Q9BUQ8 820 aaKnown RBP16.06■□□□□ 0.16
HDAC6-204ENST00000376643 RPF1Q9H9Y2 349 aaKnown RBP16.06■□□□□ 0.16
HDAC6-204ENST00000376643 ASAH2Q9NR71 780 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 DLGAP2Q9P1A6 1054 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 FBXO4Q9UKT5 387 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 CITO14578 2027 aa16.06■□□□□ 0.16
HDAC6-204ENST00000376643 K7ENM7 598 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 M0QZQ0 153 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 MAN2B1O00754 1011 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 OGTO15294 1046 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 LAMTOR5O43504 91 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 OAZ2O95190 189 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 FGF19O95750 216 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 PIGRP01833 764 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 CXCL8P10145 99 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 PDCP20941 246 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 UBXN2BQ14CS0 331 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 GPBP1Q86WP2 473 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 MYCT1Q8N699 235 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 BEST2Q8NFU1 509 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 DEPDC1BQ8WUY9 529 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 ING5Q8WYH8 240 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 IRF7Q92985 503 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 C18orf25Q96B23 403 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-204ENST00000376643 MCRS1Q96EZ8 462 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 ZBTB45Q96K62 511 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-204ENST00000376643 PLIN2Q99541 437 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 RPP25Q9BUL9 199 aaKnown RBP16.05■□□□□ 0.16
HDAC6-204ENST00000376643 TBX20Q9UMR3 447 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 FAM186AA6NE01 2351 aa16.05■□□□□ 0.16
HDAC6-204ENST00000376643 TTC26A0AVF1 554 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 TRAK2O60296 914 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 TYMPP19971 482 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 ZNF131P52739 623 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 POU5F1Q01860 360 aaKnown RBP16.04■□□□□ 0.16
HDAC6-204ENST00000376643 ADCY1Q08828 1119 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 PPP2R5DQ14738 602 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 SLFN12LQ6IEE8 588 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 DSTYKQ6XUX3 929 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 MSANTD3Q96H12 275 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 REEP2Q9BRK0 252 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 FOXQ1Q9C009 403 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 LTB4R2Q9NPC1 389 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 SPATA6Q9NWH7 488 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-204ENST00000376643 DSEQ9UL01 958 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 DERAQ9Y315 318 aa16.04■□□□□ 0.16
HDAC6-204ENST00000376643 RIF1Q5UIP0 2472 aaKnown RBP16.04■□□□□ 0.16
HDAC6-204ENST00000376643 FAM170BA6NMN3 283 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 SPTLC1O15269 473 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 KINO60870 393 aaKnown RBP16.03■□□□□ 0.16
HDAC6-204ENST00000376643 SP9P0CG40 484 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 ODC1P11926 461 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 TXLNAP40222 546 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 RPS9P46781 194 aaKnown RBP16.03■□□□□ 0.16
HDAC6-204ENST00000376643 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDAC6-204ENST00000376643 EPHB3P54753 998 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 TWF1Q12792 350 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 MYBPC2Q14324 1141 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 SLC5A9Q2M3M2 681 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 PRSS36Q5K4E3 855 aa16.03■□□□□ 0.16
HDAC6-204ENST00000376643 ARMCX5Q6P1M9 558 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms