RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 PPP1R12CQ9BZL4 782 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 IMPG2Q9BZV3 1241 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 UBE2TQ9NPD8 197 aaPredicted RBP11.26□□□□□ -0.61
PDPN-203ENST00000376061 ZNHIT6Q9NWK9 470 aaKnown RBP11.26□□□□□ -0.61
PDPN-203ENST00000376061 DPP3Q9NY33 737 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 AIPL1Q9NZN9 384 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 ITGA11Q9UKX5 1188 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 NUB1Q9Y5A7 615 aa11.26□□□□□ -0.61
PDPN-203ENST00000376061 MKI67P46013 3256 aaKnown RBP11.25□□□□□ -0.61
PDPN-203ENST00000376061 SMIM28A0A1B0GU29 152 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 C9IYK1 514 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 PTGESO14684 152 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 CST3P01034 146 aaPredicted RBP11.25□□□□□ -0.61
PDPN-203ENST00000376061 PLEKP08567 350 aaPredicted RBP11.25□□□□□ -0.61
PDPN-203ENST00000376061 KRT19P08727 400 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 CLTBP09497 229 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 POLR2BP30876 1174 aaKnown RBP11.25□□□□□ -0.61
PDPN-203ENST00000376061 CYP2C18P33260 490 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 SOX5P35711 763 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 MLH1P40692 756 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 STAT1P42224 750 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 KCNJ6P48051 423 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 CDK17Q00537 523 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 GCNT1Q02742 428 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 TRPC3Q13507 836 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 HGSNATQ68CP4 663 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 AGMOQ6ZNB7 445 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 ENOSF1Q7L5Y1 443 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 UBE2Q1Q7Z7E8 422 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 ZNF598Q86UK7 904 aaKnown RBP11.25□□□□□ -0.61
PDPN-203ENST00000376061 RTN4RL1Q86UN2 441 aaPredicted RBP11.25□□□□□ -0.61
PDPN-203ENST00000376061 ECHDC2Q86YB7 292 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 TMTC1Q8IUR5 882 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 KIAA1524Q8TCG1 905 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 SHC3Q92529 594 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 SCLYQ96I15 445 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 ARID3AQ99856 593 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 ZMYND15Q9H091 742 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 RGS18Q9NS28 235 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 RNF19AQ9NV58 838 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 ARHGAP20Q9P2F6 1191 aa11.25□□□□□ -0.61
PDPN-203ENST00000376061 GFPT2O94808 682 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 CLSTN1O94985 981 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 CXCL10P02778 98 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 SERPING1P05155 500 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 SKIP12755 728 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 FERP16591 822 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 MFAP3P55082 362 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 CCL23P55773 120 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 ARID5AQ03989 594 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
PDPN-203ENST00000376061 CUL2Q13617 745 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 TCTN1Q2MV58 587 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 SGSM1Q2NKQ1 1148 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 IRF2BP2Q7Z5L9 587 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 DBF4BQ8NFT6 615 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 BEST2Q8NFU1 509 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 SEPT8Q92599 483 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 TAF4BQ92750 862 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 FAM81BQ96LP2 452 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 PPP1R10Q96QC0 940 aaKnown RBP11.24□□□□□ -0.61
PDPN-203ENST00000376061 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 GAD1Q99259 594 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 FTHL17Q9BXU8 183 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 UBQLN1Q9UMX0 589 aaKnown RBP11.24□□□□□ -0.61
PDPN-203ENST00000376061 GIT1Q9Y2X7 761 aa11.24□□□□□ -0.61
PDPN-203ENST00000376061 TSC2P49815 1807 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 TTC3P53804 2025 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 ARL5CA6NH57 179 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 ESPNB1AK53 854 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 FOXN3O00409 490 aaPredicted RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 PPEF2O14830 753 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 XPOTO43592 962 aaKnown RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 EVI5O60447 810 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 PARNO95453 639 aaKnown RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 STAU1O95793 577 aaKnown RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 EN2P19622 333 aaPredicted RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 IBSPP21815 317 aaPredicted RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 TBXAS1P24557 533 aaPredicted RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 ATICP31939 592 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 EIF4A3P38919 411 aaKnown RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 PRKCIP41743 596 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 ASPAP45381 313 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 AFF1P51825 1210 aaKnown RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 RBP5P82980 135 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 TDRD12Q587J7 1177 aaKnown RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 TOGARAM2Q6ZUX3 1019 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 FMNL3Q8IVF7 1028 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 FAM71AQ8IYT1 594 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 C17orf53Q8N3J3 647 aaPredicted RBP11.23□□□□□ -0.61
PDPN-203ENST00000376061 UBR7Q8N806 425 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 GSTCDQ8NEC7 633 aa11.23□□□□□ -0.61
PDPN-203ENST00000376061 APBB2Q92870 758 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms