RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 TPM3P06753 285 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TMEM62Q0P6H9 643 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 FILIP1LQ4L180 1135 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 KLHDC7AQ5VTJ3 777 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 LUZP1Q86V48 1076 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CRYBG2Q8N1P7 616 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SHC3Q92529 594 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 RNF39Q9H2S5 420 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 IKZF4Q9H2S9 585 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TET1Q8NFU7 2136 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CLIC2O15247 247 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CTSHP09668 335 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 ASPAP45381 313 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CETN1Q12798 172 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CBWD6Q4V339 395 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CBWD3Q5JTY5 395 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CBWD5Q5RIA9 395 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 BAP1Q92560 729 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SCLYQ96I15 445 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 MIOSQ9NXC5 875 aa12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.48
CSGALNACT2-201ENST00000374466 GOLGA6L19H0YKK7 550 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 AP5Z1O43299 807 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 NFICP08651 508 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 MAGEA10P43363 369 aaPredicted RBP12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 MXI1P50539 228 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 MYL7Q01449 175 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TRIM65Q6PJ69 517 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 ZNF276Q8N554 614 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CALR3Q96L12 384 aaKnown RBP12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 STK33Q9BYT3 514 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 APEX2Q9UBZ4 518 aa12.02□□□□□ -0.48
CSGALNACT2-201ENST00000374466 DLG4P78352 724 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 ARHGAP17Q68EM7 881 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 ZNF365Q70YC5 407 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 FGFR4P22455 802 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 CYP2J2P51589 502 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 FAM71AQ8IYT1 594 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 COLGALT1Q8NBJ5 622 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 SAAL1Q96ER3 474 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 SCLT1Q96NL6 688 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 INTS2Q9H0H0 1204 aaKnown RBP12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 NRDE2Q9H7Z3 1164 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 ABCB6Q9NP58 842 aa12.02□□□□□ -0.49
CSGALNACT2-201ENST00000374466 RBAK-RBAKDNI3L0D1 243 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 GSE1Q14687 1217 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 STILQ15468 1287 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 CCDC40Q4G0X9 1142 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 CYP26C1Q6V0L0 522 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 PANX2Q96RD6 677 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 COLEC11Q9BWP8 271 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 AAASQ9NRG9 546 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 PCDHGC3Q9UN70 934 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 BECN2A8MW95 431 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 SOX4Q06945 474 aaPredicted RBP12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 FKBP15Q5T1M5 1219 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 CEP120Q8N960 986 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 OR5B17Q8NGF7 314 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 NAP1L5Q96NT1 182 aaPredicted RBP12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 NIF3L1Q9GZT8 377 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 PDE11AQ9HCR9 933 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 PNPLA8Q9NP80 782 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 ANKFY1Q9P2R3 1169 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 OBSL1O75147 1896 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 P4HA1P13674 534 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 SCNN1AP37088 669 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 ACOT2P49753 483 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 FAM171BQ6P995 826 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 TMEM184AQ6ZMB5 413 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 SEMA4DQ92854 862 aa12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 LBHD1Q9BQE6 289 aaPredicted RBP12.01□□□□□ -0.49
CSGALNACT2-201ENST00000374466 GALTP07902 379 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 HS1BP3Q53T59 392 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 FNBP1Q96RU3 617 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 TRIM6Q9C030 488 aaPredicted RBP12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 POLD4Q9HCU8 107 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 AVENQ9NQS1 362 aaPredicted RBP12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 MAPK8IP1Q9UQF2 711 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 HSFX4A0A1B0GTS1 333 aaPredicted RBP12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 HSFX3A0A1B0GWH4 333 aaPredicted RBP12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 ATP1A3P13637 1013 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 TAF6P49848 677 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 CCL23P55773 120 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 DSG1Q02413 1049 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 NCOA4Q13772 614 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 PIK3R5Q8WYR1 880 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 IL37Q9NZH6 218 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 BZW2Q9Y6E2 419 aaKnown RBP12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 MYO1EQ12965 1108 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 EXOC3L4Q17RC7 722 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 SPECC1LQ69YQ0 1117 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 BEND5Q7L4P6 421 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 ARCQ7LC44 396 aa12□□□□□ -0.49
CSGALNACT2-201ENST00000374466 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms