RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 GCLCP48506 637 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-203ENST00000374429 RWDD2BP57060 319 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 IFT88Q13099 833 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 FAM160B1Q5W0V3 765 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 ZC3H18Q86VM9 953 aaKnown RBP11.5□□□□□ -0.57
CXCL12-203ENST00000374429 GPC2Q8N158 579 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 EPS8L3Q8TE67 593 aaKnown RBP11.5□□□□□ -0.57
CXCL12-203ENST00000374429 CTNNAL1Q9UBT7 734 aa11.5□□□□□ -0.57
CXCL12-203ENST00000374429 R3HDM2Q9Y2K5 976 aaKnown RBP11.5□□□□□ -0.57
CXCL12-203ENST00000374429 HCRTO43612 131 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 CSPG5O95196 566 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 CTSHP09668 335 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 NEFHP12036 1026 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 YBX3P16989 372 aaKnown RBP eCLIP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 AKAP5P24588 427 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 EPHX2P34913 555 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 IRAK1P51617 712 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 YARSP54577 528 aaKnown RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 DENND2CQ68D51 928 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 C12orf29Q8N999 325 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 EXOC4Q96A65 974 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 LBHD1Q9BQE6 289 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 RREB1Q92766 1687 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 WDR91A4D1P6 747 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 FARP2O94887 1054 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 LCA5LO95447 670 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 KRT1P04264 644 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 KRT17Q04695 432 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 PPP6R3Q5H9R7 873 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 TXNRD3NBQ6F5E7 133 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 TTC27Q6P3X3 843 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 EMBQ6PCB8 327 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 ANKMY2Q8IV38 441 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 SYT17Q9BSW7 474 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 PIH1D1Q9NWS0 290 aaKnown RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 TARSL2A2RTX5 802 aaKnown RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 SPATA31C2B4DYI2 1134 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 SGK1O00141 431 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 EBAG9O00559 213 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 ATP8B1O43520 1251 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 CAND2O75155 1236 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 PPP1R37O75864 691 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 IFI35P80217 286 aaPredicted RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 CDR2Q01850 454 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 NGRNQ9NPE2 291 aaKnown RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 GPATCH2LQ9NWQ4 482 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 KCND2Q9NZV8 630 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 CPSF2Q9P2I0 782 aaKnown RBP11.49□□□□□ -0.57
CXCL12-203ENST00000374429 PARP2Q9UGN5 583 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 AGAP1Q9UPQ3 857 aa11.49□□□□□ -0.57
CXCL12-203ENST00000374429 DKC1O60832 514 aaKnown RBP eCLIP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 PRKCIP41743 596 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 RPL21P46778 160 aaKnown RBP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 FAXCQ5TGI0 409 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 LIN9Q5TKA1 542 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 DPY19L2P1Q6NXN4 242 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 DNAJC24Q6P3W2 148 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 RHOT2Q8IXI1 618 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ALG13Q9NP73 1137 aaKnown RBP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 RASAL2Q9UJF2 1139 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 CCL15-CCL14A0A0B4J2E2 113 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 EXTL3O43909 919 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 TAS2R40P59535 323 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 BEX3Q00994 111 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 CUL2Q13617 745 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 NEDD9Q14511 834 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 PPP2R5DQ14738 602 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 CCL15Q16663 113 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ERICH1Q86X53 443 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ANKRD13AQ8IZ07 590 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ZDHHC14Q8IZN3 488 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 PRELID2Q8N945 189 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 MTMR14Q8NCE2 650 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ZBED3Q96IU2 234 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 KLF6Q99612 283 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ZSWIM1Q9BR11 485 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 VPS37BQ9H9H4 285 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 RBPJLQ9UBG7 517 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 HEY1Q9Y5J3 304 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 NR2E3Q9Y5X4 410 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 GOLGA8RI6L899 631 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 RGS16O15492 202 aaPredicted RBP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 TUBBP07437 444 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 RDXP35241 583 aaKnown RBP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ATF7IP2Q5U623 682 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 OR6B2Q6IFH4 312 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 LBX2Q6XYB7 198 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 KIAA0319LQ8IZA0 1049 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ZNF606Q8WXB4 792 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 PCYT2Q99447 389 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 HERPUD2Q9BSE4 406 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 RPF1Q9H9Y2 349 aaKnown RBP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 ADARB2Q9NS39 739 aaKnown RBP11.48□□□□□ -0.57
CXCL12-203ENST00000374429 CISHQ9NSE2 258 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 SYNGAP1Q96PV0 1343 aa11.48□□□□□ -0.57
CXCL12-203ENST00000374429 NPTXRO95502 500 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms