RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 SIK3Q9Y2K2 1263 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 R3HCC1Q9Y3T6 440 aaKnown RBP13.8□□□□□ -0.2
GJB1-202ENST00000374022 CASTOR2A6NHX0 329 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 GJB5O95377 273 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 CST3P01034 146 aaPredicted RBP13.8□□□□□ -0.2
GJB1-202ENST00000374022 SLC9A1P19634 815 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 PON1P27169 355 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 LRPAP1P30533 357 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 PBX1P40424 430 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 KLK7P49862 253 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 RBP5P82980 135 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 DSC1Q08554 894 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 TAF3Q5VWG9 929 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 EHBP1Q8NDI1 1231 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 LMO3Q8TAP4 145 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 ZNF689Q96CS4 500 aaPredicted RBP13.8□□□□□ -0.2
GJB1-202ENST00000374022 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
GJB1-202ENST00000374022 GDF15Q99988 308 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 INTS2Q9H0H0 1204 aaKnown RBP13.8□□□□□ -0.2
GJB1-202ENST00000374022 RC3H2Q9HBD1 1191 aaKnown RBP13.8□□□□□ -0.2
GJB1-202ENST00000374022 CACNG4Q9UBN1 327 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 AGAP1Q9UPQ3 857 aa13.8□□□□□ -0.2
GJB1-202ENST00000374022 ANO9A1A5B4 782 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 PPEF2O14830 753 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 B4GALT3O60512 393 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 LRRN2O75325 713 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 DDHD2O94830 711 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 ATP2A2P16615 1042 aaKnown RBP13.79□□□□□ -0.2
GJB1-202ENST00000374022 MYL6P60660 151 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 ZNF280BQ86YH2 543 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 HERC6Q8IVU3 1022 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 PHOSPHO2Q8TCD6 241 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 RNPC3Q96LT9 517 aaKnown RBP13.79□□□□□ -0.2
GJB1-202ENST00000374022 FAM193BQ96PV7 902 aaPredicted RBP13.79□□□□□ -0.2
GJB1-202ENST00000374022 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 LSM14BQ9BX40 385 aaKnown RBP13.79□□□□□ -0.2
GJB1-202ENST00000374022 IMPG2Q9BZV3 1241 aa13.79□□□□□ -0.2
GJB1-202ENST00000374022 UBE2OQ9C0C9 1292 aaKnown RBP13.79□□□□□ -0.2
GJB1-202ENST00000374022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.2
GJB1-202ENST00000374022 TSC2P49815 1807 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 PIRO00625 290 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 CLSTN1O94985 981 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 ASS1P00966 412 aaKnown RBP13.78□□□□□ -0.2
GJB1-202ENST00000374022 RPL9P32969 192 aaKnown RBP13.78□□□□□ -0.2
GJB1-202ENST00000374022 CLCNKBP51801 687 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 SHHQ15465 462 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 COLGALT2Q8IYK4 626 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 CMTR2Q8IYT2 770 aaKnown RBP13.78□□□□□ -0.2
GJB1-202ENST00000374022 CCDC150Q8NCX0 1101 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 UROC1Q96N76 676 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 PAAF1Q9BRP4 392 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 HCSTQ9UBK5 93 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 PODXLO00592 558 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 ZC3H11AO75152 810 aaKnown RBP eCLIP13.78□□□□□ -0.2
GJB1-202ENST00000374022 ATICP31939 592 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 NOP14P78316 857 aaKnown RBP13.78□□□□□ -0.2
GJB1-202ENST00000374022 HTRA4P83105 476 aaPredicted RBP13.78□□□□□ -0.2
GJB1-202ENST00000374022 LRMPQ12912 555 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
GJB1-202ENST00000374022 UPP1Q16831 310 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 ZNF699Q32M78 642 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 WDR44Q5JSH3 913 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 LRRC52Q8N7C0 313 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 DDX27Q96GQ7 796 aaKnown RBP13.78□□□□□ -0.2
GJB1-202ENST00000374022 HPDLQ96IR7 371 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 ZNF560Q96MR9 790 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 ZBED2Q9BTP6 218 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
GJB1-202ENST00000374022 DNAJB4Q9UDY4 337 aa13.78□□□□□ -0.2
GJB1-202ENST00000374022 ITIH6Q6UXX5 1313 aa13.77□□□□□ -0.2
GJB1-202ENST00000374022 VWA8A3KMH1 1905 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 CDC25BP30305 580 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 APBA1Q02410 837 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 MYO1EQ12965 1108 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 SPECC1LQ69YQ0 1117 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 SPOPLQ6IQ16 392 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 NEK11Q8NG66 645 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 RABGGTAQ92696 567 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 TAF4BQ92750 862 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 NT5C1BQ96P26 610 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 VRTNQ9H8Y1 702 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 APEX2Q9UBZ4 518 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 INSL6Q9Y581 213 aa13.77□□□□□ -0.21
GJB1-202ENST00000374022 LAMA2P24043 3122 aaKnown RBP13.77□□□□□ -0.21
GJB1-202ENST00000374022 STAU1O95793 577 aaKnown RBP13.76□□□□□ -0.21
GJB1-202ENST00000374022 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
GJB1-202ENST00000374022 GTF2F1P35269 517 aaKnown RBP eCLIP13.76□□□□□ -0.21
GJB1-202ENST00000374022 PNPLA4P41247 253 aa13.76□□□□□ -0.21
GJB1-202ENST00000374022 OR1G1P47890 313 aa13.76□□□□□ -0.21
GJB1-202ENST00000374022 TAF6P49848 677 aa13.76□□□□□ -0.21
GJB1-202ENST00000374022 DPY19L2P1Q6NXN4 242 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms