RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 STAMQ92783 540 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 ACSF2Q96CM8 615 aaPredicted RBP11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 BICD1Q96G01 975 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 FAM84AQ96KN4 292 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 SUSD3Q96L08 255 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 ST6GALNAC4Q9H4F1 302 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 PIDD1Q9HB75 910 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 TBC1D7Q9P0N9 293 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 FBXL5Q9UKA1 691 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 ZDHHC9Q9Y397 364 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 TIMM13Q9Y5L4 95 aaPredicted RBP11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 MORC2Q9Y6X9 1032 aaPredicted RBP11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 WDR87Q6ZQQ6 2873 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 SCN1AP35498 2009 aa11.97□□□□□ -0.49
EXOSC1-202ENST00000370885 PIEZO1Q92508 2521 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 CACNA1HO95180 2353 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 ANHXE9PGG2 379 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 SPTLC1O15269 473 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 PI15O43692 258 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 NFICP08651 508 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 HNRNPA1P09651 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 RPL9P32969 192 aaKnown RBP11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 MATR3P43243 847 aaKnown RBP eCLIP11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 AARSP49588 968 aaKnown RBP eCLIP11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 HTR4Q13639 388 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 SLC5A9Q2M3M2 681 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 PPM1LQ5SGD2 360 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 RRAGBQ5VZM2 374 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 CWF19L1Q69YN2 538 aaKnown RBP11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 JADE1Q6IE81 842 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 ANKS3Q6ZW76 656 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 GLIS3Q8NEA6 775 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 FGF14Q92915 247 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 MSTO1Q9BUK6 570 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 PLEKHA5Q9HAU0 1116 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 STK17AQ9UEE5 414 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 DPP7Q9UHL4 492 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 KCNG1Q9UIX4 513 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 DUSP12Q9UNI6 340 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 STYXL1Q9Y6J8 313 aa11.96□□□□□ -0.49
EXOSC1-202ENST00000370885 FRMD3A2A2Y4 597 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 KRBA1A5PL33 1030 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 H0YCG3 227 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 M0QZQ0 153 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 SYN3O14994 580 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 TRAPPC3O43617 180 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 TBCAO75347 108 aaKnown RBP11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 OR4Q2P0C623 313 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 FSHRP23945 695 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 HOXA9P31269 272 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 ARPP19P56211 112 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 E2F4Q16254 413 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 FOXD4L6Q3SYB3 417 aaPredicted RBP11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 LIN9Q5TKA1 542 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 PDXDC1Q6P996 788 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 SHC4Q6S5L8 630 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 PARM1Q6UWI2 310 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 FOXD4L3Q6VB84 417 aaPredicted RBP11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 PDILTQ8N807 584 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 ZNF461Q8TAF7 563 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 HPS3Q969F9 1004 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 CHAMP1Q96JM3 812 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 CRISPLD1Q9H336 500 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 ZSCAN16Q9H4T2 348 aaPredicted RBP11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 POLIQ9UNA4 740 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 NUB1Q9Y5A7 615 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 TSC2P49815 1807 aa11.95□□□□□ -0.5
EXOSC1-202ENST00000370885 ARHGEF37A1IGU5 675 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 CFHP08603 1231 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 ATF2P15336 505 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 CYP3A5P20815 502 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 PTMSP20962 102 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 HOXD13P35453 343 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 CCR2P41597 374 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 CDR1P51861 262 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 UVSSAQ2YD98 709 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 CTXN3Q4LDR2 81 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 RNF19BQ6ZMZ0 732 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 ALYREFQ86V81 257 aaKnown RBP11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 SUGP1Q8IWZ8 645 aaKnown RBP11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 EFCAB13Q8IY85 973 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 ING5Q8WYH8 240 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 FGF13Q92913 245 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 TCEAL4Q96EI5 215 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 TMEM209Q96SK2 561 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 RPF1Q9H9Y2 349 aaKnown RBP11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 IGSF9Q9P2J2 1179 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 CCDC39Q9UFE4 941 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 UBQLN1Q9UMX0 589 aaKnown RBP11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 NUMBLQ9Y6R0 609 aa11.94□□□□□ -0.5
EXOSC1-202ENST00000370885 ANO9A1A5B4 782 aa11.93□□□□□ -0.5
EXOSC1-202ENST00000370885 PIRO00625 290 aa11.93□□□□□ -0.5
EXOSC1-202ENST00000370885 SPTLC2O15270 562 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms