RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 COPB2P35606 906 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 LONP1P36776 959 aaKnown RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 ALDH5A1P51649 535 aaPredicted RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 CCNA1P78396 465 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 SPIRE1Q08AE8 756 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 SREBF2Q12772 1141 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 NOGQ13253 232 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 CRHR2Q13324 411 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 ITGB3BPQ13352 177 aaPredicted RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 CAMK4Q16566 473 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 ZNF792Q3KQV3 632 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 LONRF3Q496Y0 759 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 WDR78Q5VTH9 848 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 CCDC73Q6ZRK6 1079 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 NIPA1Q7RTP0 329 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 GPR142Q7Z601 462 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 C11orf96Q7Z7L8 435 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 LRRTM3Q86VH5 581 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 MYO1HQ8N1T3 1032 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 IGSF22Q8N9C0 903 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 ATL2Q8NHH9 583 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 TTC8Q8TAM2 541 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 RELTQ969Z4 430 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 MMP19Q99542 508 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 MIPEPQ99797 713 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 TM9SF2Q99805 663 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 LGR4Q9BXB1 951 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 CLSTN2Q9H4D0 955 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 TTC12Q9H892 705 aaPredicted RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 ARHGEF4Q9NR80 690 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 KCNH7Q9NS40 1196 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 VAV3Q9UKW4 847 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 TPX2Q9ULW0 747 aaKnown RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 DOCK3Q8IZD9 2030 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 PRR33A8MZF0 331 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 FOXN1O15353 648 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 POLR2DO15514 142 aaKnown RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 CA12O43570 354 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 PSMD10O75832 226 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 HTR3BO95264 441 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 ADORA2AP29274 412 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 CCND2P30279 289 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 SOX5P35711 763 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 SYKP43405 635 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 CAP1Q01518 475 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 SP2Q02086 613 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 PDIA5Q14554 519 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 KCTD2Q14681 263 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 KARSQ15046 597 aaKnown RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 LONRF2Q1L5Z9 754 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 ZSCAN23Q3MJ62 389 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 PRAMEF13Q5VWM6 474 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 KIAA1211LQ6NV74 962 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 XRRA1Q6P2D8 792 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 CNNM4Q6P4Q7 775 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 B3GNT9Q6UX72 402 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 FAM214BQ7L5A3 538 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 OTOP1Q7RTM1 612 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 PLEKHH3Q7Z736 793 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 WFDC3Q8IUB2 231 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 PDILTQ8N807 584 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 DNERQ8NFT8 737 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 TMEM40Q8WWA1 233 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 FAM20AQ96MK3 541 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 INPP4AQ96PE3 977 aaPredicted RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 IWS1Q96ST2 819 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 SLC9A7Q96T83 725 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 PLIN2Q99541 437 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 CCSER1Q9C0I3 900 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 AGO4Q9HCK5 861 aaKnown RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 PRDM7Q9NQW5 492 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 DDX19AQ9NUU7 478 aaKnown RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 LRWD1Q9UFC0 647 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 PCDHA12Q9UN75 941 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 TELO2Q9Y4R8 837 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 A0A087WWV3 80 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 GFRA2O00451 464 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 STRNO43815 780 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 LRIG2O94898 1065 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 RASGRP1O95267 797 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 MAPK4P31152 587 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 NEK2P51955 445 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 GRB10Q13322 594 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 STXBP2Q15833 593 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 IFI16Q16666 785 aaKnown RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 CCDC183Q5T5S1 534 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 OVOS1Q6IE37 1185 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 KRBA2Q6ZNG9 492 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 CABP7Q86V35 215 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 KRTAP1-3Q8IUG1 177 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 SLFN12Q8IYM2 578 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 GRAMD1CQ8IYS0 662 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 ABRAQ8N0Z2 381 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 NPLOC4Q8TAT6 608 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 USP6NLQ92738 828 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 ERCC4Q92889 916 aaPredicted RBP3.95□□□□□ -1.78
MCF2-202ENST00000370573 DHX58Q96C10 678 aa3.95□□□□□ -1.78
MCF2-202ENST00000370573 TIGD1Q96MW7 591 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms