RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 SLC39A4Q6P5W5 647 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 RGS9BPQ6ZS82 235 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 ENOSF1Q7L5Y1 443 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 ANKS1BQ7Z6G8 1248 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 LARGE2Q8N3Y3 721 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 SLC17A8Q8NDX2 589 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 TRIM11Q96F44 468 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 RBM15Q96T37 977 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC01561-201ENST00000369071 UBN1Q9NPG3 1134 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 ZBTB21Q9ULJ3 1066 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 CHKBQ9Y259 395 aa13.35□□□□□ -0.27
LINC01561-201ENST00000369071 ASTN2O75129 1339 aaPredicted RBP13.35□□□□□ -0.27
LINC01561-201ENST00000369071 PRPF4O43172 522 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC01561-201ENST00000369071 PSTPIP1O43586 416 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 ECE2O60344 883 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 SPAG7O75391 227 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 CYP1A1P04798 512 aaPredicted RBP13.34□□□□□ -0.27
LINC01561-201ENST00000369071 SLC18A1P54219 525 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 TAS2R40P59535 323 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 CYP24A1Q07973 514 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 NR1H3Q13133 447 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 CCDC142Q17RM4 750 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 TKFCQ3LXA3 575 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 MON1BQ7L1V2 547 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 TDRPQ86YL5 185 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 KATNAL2Q8IYT4 538 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 OGFOD1Q8N543 542 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 OSBPL8Q9BZF1 889 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 HERC5Q9UII4 1024 aaKnown RBP13.34□□□□□ -0.27
LINC01561-201ENST00000369071 USP21Q9UK80 565 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 PHTF1Q9UMS5 762 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 UBIAD1Q9Y5Z9 338 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 USH1CQ9Y6N9 552 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 NEBLO76041 1014 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 GNAZP19086 355 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 NPTX2P47972 431 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 DNAJC3Q13217 504 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 P3H1Q32P28 736 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 C2CD6Q53TS8 623 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 FAM102BQ5T8I3 360 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 MIS18BP1Q6P0N0 1132 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 CEP128Q6ZU80 1094 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 FAM160B2Q86V87 743 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 ZNF677Q86XU0 584 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 RHOT1Q8IXI2 618 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 DHX37Q8IY37 1157 aaKnown RBP13.34□□□□□ -0.27
LINC01561-201ENST00000369071 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 ERP27Q96DN0 273 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
LINC01561-201ENST00000369071 CFAP57Q96MR6 1250 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 PAIP2Q9BPZ3 127 aaKnown RBP13.34□□□□□ -0.27
LINC01561-201ENST00000369071 KIFC3Q9BVG8 833 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 KIAA1586Q9HCI6 787 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 NKX1-2Q9UD57 310 aaPredicted RBP13.34□□□□□ -0.27
LINC01561-201ENST00000369071 GRID1Q9ULK0 1009 aa13.34□□□□□ -0.27
LINC01561-201ENST00000369071 EXOC1LA0A1B0GW35 172 aa13.33□□□□□ -0.28
LINC01561-201ENST00000369071 GSTTP1A0A1W2PQM5 241 aa13.33□□□□□ -0.28
LINC01561-201ENST00000369071 LIN7AO14910 233 aaPredicted RBP13.33□□□□□ -0.28
LINC01561-201ENST00000369071 ZC3H11AO75152 810 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC01561-201ENST00000369071 SMNDC1O75940 238 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC01561-201ENST00000369071 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
LINC01561-201ENST00000369071 MEX3CQ5U5Q3 659 aaKnown RBP13.33□□□□□ -0.28
LINC01561-201ENST00000369071 AGGF1Q8N302 714 aaeCLIP13.33□□□□□ -0.28
LINC01561-201ENST00000369071 INPP5DQ92835 1189 aa13.33□□□□□ -0.28
LINC01561-201ENST00000369071 ANKRD27Q96NW4 1050 aa13.33□□□□□ -0.28
LINC01561-201ENST00000369071 TMEM237Q96Q45 408 aa13.33□□□□□ -0.28
LINC01561-201ENST00000369071 TMX4Q9H1E5 349 aaPredicted RBP13.33□□□□□ -0.28
LINC01561-201ENST00000369071 PCDHB2Q9Y5E7 798 aa13.33□□□□□ -0.28
LINC01561-201ENST00000369071 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.28
LINC01561-201ENST00000369071 SKAP2O75563 359 aaPredicted RBP13.32□□□□□ -0.28
LINC01561-201ENST00000369071 T-ENOLP0DO92 83 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 CDC25CP30307 473 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
LINC01561-201ENST00000369071 MRPS9P82933 396 aaKnown RBP13.32□□□□□ -0.28
LINC01561-201ENST00000369071 SPARCL1Q14515 664 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 PDK4Q16654 411 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
LINC01561-201ENST00000369071 C15orf39Q6ZRI6 1047 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 VSIG1Q86XK7 387 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 EXD1Q8NHP7 514 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 AGBL1Q96MI9 1066 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 TRABDQ9H4I3 376 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 SAYSD1Q9NPB0 183 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 SLCO1B3Q9NPD5 702 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 SRCAPQ6ZRS2 3230 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 DENND3A2RUS2 1198 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 DNALI1O14645 258 aaPredicted RBP13.32□□□□□ -0.28
LINC01561-201ENST00000369071 EDF1O60869 148 aaKnown RBP13.32□□□□□ -0.28
LINC01561-201ENST00000369071 PEX11AO75192 247 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 TARSP26639 723 aaKnown RBP13.32□□□□□ -0.28
LINC01561-201ENST00000369071 ABL2P42684 1182 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 BLMHQ13867 455 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 PKN2Q16513 984 aaKnown RBP13.32□□□□□ -0.28
LINC01561-201ENST00000369071 PCNX4Q63HM2 1172 aa13.32□□□□□ -0.28
LINC01561-201ENST00000369071 PLA2G4FQ68DD2 849 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms