RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ALKBH5Q6P6C2 394 aaKnown RBP20.86■□□□□ 0.93
CHTOP-204ENST00000368694 KIF18AQ8NI77 898 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 SLC20A1Q8WUM9 679 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 NIF3L1Q9GZT8 377 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 CXCL16Q9H2A7 254 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 ACP6Q9NPH0 428 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 DPP3Q9NY33 737 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 KLK14Q9P0G3 267 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 NAGPAQ9UK23 515 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 PADI3Q9ULW8 664 aa20.86■□□□□ 0.93
CHTOP-204ENST00000368694 DDX3XO00571 662 aaKnown RBP eCLIP20.85■□□□□ 0.934e-10■□□□□ 9.1
CHTOP-204ENST00000368694 CKBP12277 381 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 ZSCAN20P17040 1043 aaPredicted RBP20.85■□□□□ 0.93
CHTOP-204ENST00000368694 POLR2BP30876 1174 aaKnown RBP20.85■□□□□ 0.93
CHTOP-204ENST00000368694 GLRA4Q5JXX5 417 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 LNX1Q8TBB1 728 aaPredicted RBP20.85■□□□□ 0.93
CHTOP-204ENST00000368694 EPS8L1Q8TE68 723 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 AGPAT1Q99943 283 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 OSBPL7Q9BZF2 842 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 XYLT2Q9H1B5 865 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 CHST12Q9NRB3 414 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 ITGA11Q9UKX5 1188 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 DERAQ9Y315 318 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 PCDHB4Q9Y5E5 795 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 CAND2O75155 1236 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 GTF2F1P35269 517 aaKnown RBP eCLIP20.85■□□□□ 0.93
CHTOP-204ENST00000368694 TAF3Q5VWG9 929 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 SCARA5Q6ZMJ2 495 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 ZNF662Q6ZS27 426 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 SMG8Q8ND04 991 aaKnown RBP20.85■□□□□ 0.93
CHTOP-204ENST00000368694 U2AF1L4Q8WU68 220 aaKnown RBP20.85■□□□□ 0.93
CHTOP-204ENST00000368694 ZMAT2Q96NC0 199 aaKnown RBP20.85■□□□□ 0.93
CHTOP-204ENST00000368694 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 CNTN3Q9P232 1028 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 NXF1Q9UBU9 619 aaKnown RBP20.85■□□□□ 0.93
CHTOP-204ENST00000368694 PCDHB2Q9Y5E7 798 aa20.85■□□□□ 0.93
CHTOP-204ENST00000368694 LPIN1Q14693 890 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 ZNF667Q5HYK9 610 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 ZNF569Q5MCW4 686 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 TMEM270Q6UE05 265 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 NOP9Q86U38 636 aaKnown RBP20.84■□□□□ 0.93
CHTOP-204ENST00000368694 RPUSD2Q8IZ73 545 aaKnown RBP20.84■□□□□ 0.93
CHTOP-204ENST00000368694 DNAJC5GQ8N7S2 189 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 TAF4BQ92750 862 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 SYT11Q9BT88 431 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 ERVK-5Q9HDB9 667 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 FAM105AQ9NUU6 356 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 RNF19AQ9NV58 838 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 OGDHLQ9ULD0 1010 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 AGAP1Q9UPQ3 857 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 DUSP10Q9Y6W6 482 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 MACROD2A1Z1Q3 448 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 CYP11B1P15538 503 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 NAB2Q15742 525 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 WDR72Q3MJ13 1102 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 FAM26DQ5JW98 314 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 C10orf76Q5T2E6 689 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 ALKAL1Q6UXT8 129 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 WDR24Q96S15 920 aa20.84■□□□□ 0.93
CHTOP-204ENST00000368694 TMCO5BA8MYB1 307 aa20.83■□□□□ 0.93
CHTOP-204ENST00000368694 CD58P19256 250 aa20.83■□□□□ 0.93
CHTOP-204ENST00000368694 RBP5P82980 135 aa20.83■□□□□ 0.93
CHTOP-204ENST00000368694 HACE1Q8IYU2 909 aa20.83■□□□□ 0.93
CHTOP-204ENST00000368694 BEST2Q8NFU1 509 aa20.83■□□□□ 0.93
CHTOP-204ENST00000368694 SLC30A5Q8TAD4 765 aa20.83■□□□□ 0.93
CHTOP-204ENST00000368694 NOCTQ9UK39 431 aaKnown RBP20.83■□□□□ 0.93
CHTOP-204ENST00000368694 ACO1P21399 889 aaKnown RBP20.82■□□□□ 0.92
CHTOP-204ENST00000368694 ATICP31939 592 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 DNAAF5Q86Y56 855 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 USP38Q8NB14 1042 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 CXorf38Q8TB03 319 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 C18orf25Q96B23 403 aaPredicted RBP20.82■□□□□ 0.92
CHTOP-204ENST00000368694 HPDLQ96IR7 371 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 PACSIN1Q9BY11 444 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 TUBGCP4Q9UGJ1 667 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 POLIQ9UNA4 740 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 CASQ1P31415 396 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 CTU1Q7Z7A3 348 aaKnown RBP20.82■□□□□ 0.92
CHTOP-204ENST00000368694 RBBP8NLQ8NC74 664 aaPredicted RBP20.82■□□□□ 0.92
CHTOP-204ENST00000368694 OLIG1Q8TAK6 271 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 SECISBP2LQ93073 1101 aaKnown RBP20.82■□□□□ 0.92
CHTOP-204ENST00000368694 SEZ6LQ9BYH1 1024 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 MYO1AQ9UBC5 1043 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 PAXBP1Q9Y5B6 917 aa20.82■□□□□ 0.92
CHTOP-204ENST00000368694 SMIM28A0A1B0GU29 152 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 FAM170AA1A519 330 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 PJA2O43164 708 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 CALCAP01258 141 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 MMEP08473 750 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 WEE2P0C1S8 567 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 IBSPP21815 317 aaPredicted RBP20.81■□□□□ 0.92
CHTOP-204ENST00000368694 ASPAP45381 313 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 BPIFB4P59827 614 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 CISHQ9NSE2 258 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 UBQLN1Q9UMX0 589 aaKnown RBP20.81■□□□□ 0.92
CHTOP-204ENST00000368694 XPOTO43592 962 aaKnown RBP20.81■□□□□ 0.92
CHTOP-204ENST00000368694 ITGA4P13612 1032 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 P4HA1P13674 534 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 CDK7P50613 346 aa20.81■□□□□ 0.92
CHTOP-204ENST00000368694 ZBTB6Q15916 424 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms