RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LARSQ9P2J5 1176 aaKnown RBP17.48■□□□□ 0.39
CKS1B-202ENST00000368436 TUBGCP4Q9UGJ1 667 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 MAFFQ9ULX9 164 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 PCDHB8Q9UN66 801 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 INSL5Q9Y5Q6 135 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 VPS13AQ96RL7 3174 aa17.48■□□□□ 0.39
CKS1B-202ENST00000368436 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 TTC26A0AVF1 554 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 H0YCG3 227 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 H3BQV1 296 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 CLTAP09496 248 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 SP9P0CG40 484 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 CEBPBP17676 345 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 LRPAP1P30533 357 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 MCM4P33991 863 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 HAUS6Q7Z4H7 955 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 MAML2Q8IZL2 1156 aaPredicted RBP17.47■□□□□ 0.39
CKS1B-202ENST00000368436 APPL2Q8NEU8 664 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 ELSPBP1Q96BH3 223 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 CDK5RAP3Q96JB5 506 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 CORO1BQ9BR76 489 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 AFF4Q9UHB7 1163 aaKnown RBP17.47■□□□□ 0.39
CKS1B-202ENST00000368436 ODF2LQ9ULJ1 636 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 MTF2Q9Y483 593 aaPredicted RBP17.47■□□□□ 0.39
CKS1B-202ENST00000368436 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.47■□□□□ 0.39
CKS1B-202ENST00000368436 R4GN57 208 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 SPTBN4Q9H254 2564 aa17.47■□□□□ 0.39
CKS1B-202ENST00000368436 M0QZQ0 153 aa17.46■□□□□ 0.39
CKS1B-202ENST00000368436 ZNF197O14709 1029 aa17.46■□□□□ 0.39
CKS1B-202ENST00000368436 CD2BP2O95400 341 aaKnown RBP17.46■□□□□ 0.39
CKS1B-202ENST00000368436 LMNAP02545 664 aaKnown RBP17.46■□□□□ 0.39
CKS1B-202ENST00000368436 CXCL8P10145 99 aa17.46■□□□□ 0.39
CKS1B-202ENST00000368436 SCP2P22307 547 aa17.46■□□□□ 0.39
CKS1B-202ENST00000368436 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
CKS1B-202ENST00000368436 TANGO2Q6ICL3 276 aa17.46■□□□□ 0.39
CKS1B-202ENST00000368436 ZNF280DQ6N043 979 aa17.46■□□□□ 0.39
CKS1B-202ENST00000368436 GVINP1Q7Z2Y8 2422 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 FAM170BA6NMN3 283 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 FAM189A1O60320 539 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 OAZ2O95190 189 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 PIGRP01833 764 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 ADRB2P07550 413 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 CYP3A5P20815 502 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 FCARP24071 287 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 MARCKSP29966 332 aaPredicted RBP17.45■□□□□ 0.38
CKS1B-202ENST00000368436 CCR2P41597 374 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 AARSP49588 968 aaKnown RBP eCLIP17.45■□□□□ 0.38
CKS1B-202ENST00000368436 SPAG1Q07617 926 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 ADCY1Q08828 1119 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 KYAT1Q16773 422 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 ZC3H14Q6PJT7 736 aaKnown RBP17.45■□□□□ 0.38
CKS1B-202ENST00000368436 TMEM130Q8N3G9 435 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 BEST2Q8NFU1 509 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 LRRC15Q8TF66 581 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 TCEAL4Q96EI5 215 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 NELL2Q99435 816 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 REEP2Q9BRK0 252 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 OXCT2Q9BYC2 517 aaPredicted RBP17.45■□□□□ 0.38
CKS1B-202ENST00000368436 BCO2Q9BYV7 579 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 LTB4R2Q9NPC1 389 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 TBX20Q9UMR3 447 aa17.45■□□□□ 0.38
CKS1B-202ENST00000368436 UBQLN1Q9UMX0 589 aaKnown RBP17.45■□□□□ 0.38
CKS1B-202ENST00000368436 COL4A2P08572 1712 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 ANK1P16157 1881 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 MOSPD3O75425 235 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 TNFSF9P41273 254 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 MATR3P43243 847 aaKnown RBP eCLIP17.44■□□□□ 0.38
CKS1B-202ENST00000368436 MAGEA9P43362 315 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 ZNF131P52739 623 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 EPHA5P54756 1037 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 YWHAHQ04917 246 aaPredicted RBP17.44■□□□□ 0.38
CKS1B-202ENST00000368436 UBXN2BQ14CS0 331 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 ZNF528Q3MIS6 628 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 FAM78AQ5JUQ0 283 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 RNF19BQ6ZMZ0 732 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 PDZD4Q76G19 769 aaPredicted RBP17.44■□□□□ 0.38
CKS1B-202ENST00000368436 KCNG4Q8TDN1 519 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 DNASE1L2Q92874 299 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 CLDN23Q96B33 292 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 KIF12Q96FN5 646 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 CALML4Q96GE6 196 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 ZNF512Q96ME7 567 aaPredicted RBP17.44■□□□□ 0.38
CKS1B-202ENST00000368436 TSPAN18Q96SJ8 248 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 BLOC1S4Q9NUP1 217 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 CEP72Q9P209 647 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 FBXO4Q9UKT5 387 aa17.44■□□□□ 0.38
CKS1B-202ENST00000368436 SHISA7A6NL88 538 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 LACTBL1A8MY62 500 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 NRG2O14511 850 aaPredicted RBP17.43■□□□□ 0.38
CKS1B-202ENST00000368436 VNN2O95498 520 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 CD72P21854 359 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 UBA7P41226 1012 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 MCM2P49736 904 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 LIG4P49917 911 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 PPP2R3AQ06190 1150 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 TWF1Q12792 350 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 ENOX2Q16206 610 aaKnown RBP17.43■□□□□ 0.38
CKS1B-202ENST00000368436 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 CYP4A22Q5TCH4 519 aa17.43■□□□□ 0.38
CKS1B-202ENST00000368436 IQCEQ6IPM2 695 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms