RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 EIF3BP55884 814 aaKnown RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 SGSM1Q2NKQ1 1148 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 WDR78Q5VTH9 848 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 TXNRD3NBQ6F5E7 133 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.42□□□□□ -0.9
THBS3-201ENST00000368378 DTX3LQ8TDB6 740 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.42□□□□□ -0.9
THBS3-201ENST00000368378 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 KDM4CQ9H3R0 1056 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 CNOT10Q9H9A5 744 aaKnown RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 ACTR5Q9H9F9 607 aaPredicted RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 C1orf112Q9NSG2 853 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 RAB20Q9NX57 234 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 KLHL14Q9P2G3 628 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 TLR3O15455 904 aaKnown RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 SUN1O94901 812 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 GAS8O95995 478 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 KITP10721 976 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 MMP13P45452 471 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 NPTX2P47972 431 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 PPP2R5CQ13362 524 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 DHX34Q14147 1143 aaKnown RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 KRT39Q6A163 491 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 SPATA21Q7Z572 469 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 SPATS2Q86XZ4 545 aaKnown RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 LMO3Q8TAP4 145 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 PPP1R13LQ8WUF5 828 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 CNKSR1Q969H4 720 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 NPHS2Q9NP85 383 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 ADAM22Q9P0K1 906 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 MRPL11Q9Y3B7 192 aaKnown RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 USP15Q9Y4E8 981 aaPredicted RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 NCANO14594 1321 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 SIPA1L1O43166 1804 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 A0A1W2PPM1 405 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 SLC26A4O43511 780 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 SNX3O60493 162 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 WEE2P0C1S8 567 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 PLS3P13797 630 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 YBX3P16989 372 aaKnown RBP eCLIP9.42□□□□□ -0.9
THBS3-201ENST00000368378 LIG4P49917 911 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 PEX5P50542 639 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 DRP2Q13474 957 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 CDO1Q16878 200 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 C1orf220Q5T0J3 134 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 FAXCQ5TGI0 409 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 DLK2Q6UY11 383 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 FBXL13Q8NEE6 735 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 ITFG2Q969R8 447 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 TLCD1Q96CP7 247 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 YIPF3Q9GZM5 350 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 MARCOQ9UEW3 520 aaPredicted RBP9.42□□□□□ -0.9
THBS3-201ENST00000368378 DNPEPQ9ULA0 475 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 AGTPBP1Q9UPW5 1226 aa9.42□□□□□ -0.9
THBS3-201ENST00000368378 CCDC195A0A1B0GUA6 201 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 PODXLO00592 558 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 GRAP2O75791 330 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 CAPN15O75808 1086 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 P4HBP07237 508 aaKnown RBP9.41□□□□□ -0.9
THBS3-201ENST00000368378 ANXA13P27216 316 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 SSTR1P30872 391 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 ARSEP51690 589 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 PKN2Q16513 984 aaKnown RBP9.41□□□□□ -0.9
THBS3-201ENST00000368378 EMC1Q8N766 993 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 CHURC1Q8WUH1 139 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 MXRA8Q9BRK3 442 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 DMAC2Q9NW81 257 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 PIH1D1Q9NWS0 290 aaKnown RBP9.41□□□□□ -0.9
THBS3-201ENST00000368378 NINJ2Q9NZG7 142 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 GTF3C4Q9UKN8 822 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 GREB1LQ9C091 1923 aaPredicted RBP9.41□□□□□ -0.9
THBS3-201ENST00000368378 KIF13BQ9NQT8 1826 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 FAM187AA6NFU0 413 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 YDJCA8MPS7 323 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 F8VP50 259 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 PIK3CDO00329 1044 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 EGFRP00533 1210 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 AGTP01019 485 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 RARGP13631 454 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 PAX3P23760 479 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 MRPS9P82933 396 aaKnown RBP9.41□□□□□ -0.9
THBS3-201ENST00000368378 MTMR2Q13614 643 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 BBS9Q3SYG4 887 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 BRDTQ58F21 947 aaPredicted RBP9.41□□□□□ -0.9
THBS3-201ENST00000368378 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 VSTM1Q6UX27 236 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 ZC3H18Q86VM9 953 aaKnown RBP9.41□□□□□ -0.9
THBS3-201ENST00000368378 SPDL1Q96EA4 605 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 RSRC1Q96IZ7 334 aaKnown RBP9.41□□□□□ -0.9
THBS3-201ENST00000368378 MCEEQ96PE7 176 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 SYT11Q9BT88 431 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 SEL1LQ9UBV2 794 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 GINS2Q9Y248 185 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 RIPK3Q9Y572 518 aa9.41□□□□□ -0.9
THBS3-201ENST00000368378 KRT1P04264 644 aa9.4□□□□□ -0.9
THBS3-201ENST00000368378 SRGAP2CP0DJJ0 459 aa9.4□□□□□ -0.9
THBS3-201ENST00000368378 FOXN2P32314 431 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms