RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CLMNQ96JQ2 1002 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 TMEM8AQ9HCN3 771 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 APEX2Q9UBZ4 518 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 SLC25A13Q9UJS0 675 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 PPLO60437 1756 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 RICTORQ6R327 1708 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 EXOC1LA0A1B0GW35 172 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 FMO5P49326 533 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 ZNF177Q13360 481 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 FMR1NBQ8N0W7 255 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-205ENST00000368213 CSGALNACT1Q8TDX6 532 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 USP33Q8TEY7 942 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 FAM198AQ9UFP1 575 aa11.35□□□□□ -0.59
PTPRK-205ENST00000368213 TMEM247A6NEH6 219 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 CTNNB1P35222 781 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 CLCN1P35523 988 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 LAMTOR4Q0VGL1 99 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 MOXD1Q6UVY6 613 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 B4GALNT4Q76KP1 1039 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 ADGRF2Q8IZF7 708 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 CAMKK2Q96RR4 588 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 KLHL14Q9P2G3 628 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 FAM50BQ9Y247 325 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 PALMO75781 387 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 TMCC1O94876 653 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 HMGCRP04035 888 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 CPA5Q8WXQ8 436 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 KAZALD1Q96I82 304 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 PPP1R13BQ96KQ4 1090 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 DNAJC17Q9NVM6 304 aaKnown RBP11.34□□□□□ -0.59
PTPRK-205ENST00000368213 RAPGEF5Q92565 580 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 A1CFQ9NQ94 594 aaKnown RBP11.34□□□□□ -0.59
PTPRK-205ENST00000368213 CSDE1O75534 798 aaKnown RBP11.34□□□□□ -0.59
PTPRK-205ENST00000368213 SLC2A3P11169 496 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 ACO1P21399 889 aaKnown RBP11.34□□□□□ -0.59
PTPRK-205ENST00000368213 C2orf54Q08AI8 447 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 PTPAQ15257 358 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 FAM171A1Q5VUB5 890 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 MIB1Q86YT6 1006 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 IQANK1A0A1B0GTG1 560 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 FAM47DPA6NHR8 397 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 FOXN1O15353 648 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 PTK2BQ14289 1009 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 FAM163AQ96GL9 167 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-205ENST00000368213 CABS1Q96KC9 395 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 FGD4Q96M96 766 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 FOPNLQ96NB1 174 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 MRIQ9BWK5 157 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 CDC23Q9UJX2 597 aa11.34□□□□□ -0.59
PTPRK-205ENST00000368213 IL9RQ01113 521 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 BRD3Q15059 726 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 ZC3H18Q86VM9 953 aaKnown RBP11.33□□□□□ -0.6
PTPRK-205ENST00000368213 SYT2Q8N9I0 419 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-205ENST00000368213 CENPKQ9BS16 269 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 CARNS1A5YM72 827 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 GOLGA8MH3BSY2 632 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 C10orf67Q8IYJ2 551 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 RUSC1Q9BVN2 902 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 SAYSD1Q9NPB0 183 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 TBK1Q9UHD2 729 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 ITM2BQ9Y287 266 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 ELNP15502 786 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 FGFR4P22455 802 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 MAP4P27816 1152 aaKnown RBP11.33□□□□□ -0.6
PTPRK-205ENST00000368213 WEE1P30291 646 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 IRX4P78413 519 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 IMPG1Q17R60 797 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 ADCK2Q7Z695 626 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 TRIM48Q8IWZ4 208 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 STN1Q9H668 368 aaKnown RBP11.33□□□□□ -0.6
PTPRK-205ENST00000368213 ZNF212Q9UDV6 495 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 F5H5T6 163 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 RTN2O75298 545 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 SYF2O95926 243 aaKnown RBP11.33□□□□□ -0.6
PTPRK-205ENST00000368213 LHX1P48742 406 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 STARD3Q14849 445 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 NFE2Q16621 373 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-205ENST00000368213 MMS22LQ6ZRQ5 1243 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 FIBCD1Q8N539 461 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 RIN2Q8WYP3 895 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-205ENST00000368213 SNTG2Q9NY99 539 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 CFAP69A5D8W1 941 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 RALBP11234 206 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 ETFBP38117 255 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 DDI1Q8WTU0 396 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 PI4K2AQ9BTU6 479 aa11.33□□□□□ -0.6
PTPRK-205ENST00000368213 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 C3P01024 1663 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 ZNF197O14709 1029 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 GSTA4O15217 222 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 PRPF4O43172 522 aaKnown RBP eCLIP11.32□□□□□ -0.66e-7■□□□□ 9.8
PTPRK-205ENST00000368213 ATP9BO43861 1147 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 MX2P20592 715 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 MUTP22033 750 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 Q4G0T1 1027 aa11.32□□□□□ -0.6
PTPRK-205ENST00000368213 GPAT2Q6NUI2 795 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms