RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
PTPN7-202ENST00000367279 ATP6V1G2O95670 118 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 CETPP11597 493 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 ETS1P14921 441 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 KRT15P19012 456 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 CETN2P41208 172 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 WNT7BP56706 349 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 PRKCEQ02156 737 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 PTK6Q13882 451 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 MPP2Q14168 576 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 TCEAL1Q15170 157 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 SPATA21Q7Z572 469 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 RBM15Q96T37 977 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■■□ 23.6
PTPN7-202ENST00000367279 TCHPQ9BT92 498 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 ST6GALNAC4Q9H4F1 302 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
PTPN7-202ENST00000367279 COQ4Q9Y3A0 265 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 EXOC1LA0A1B0GW35 172 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 PLA2G6O60733 806 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 LYPLA2O95372 231 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 UNGP13051 313 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-202ENST00000367279 CCND2P30279 289 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 GBP2P32456 591 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-202ENST00000367279 SNRPFP62306 86 aaKnown RBP13.1□□□□□ -0.31
PTPN7-202ENST00000367279 DYNLT1P63172 113 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 C7orf43Q8WVR3 580 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 N4BP2L2Q92802 583 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-202ENST00000367279 TRIM33Q9UPN9 1127 aa13.1□□□□□ -0.31
PTPN7-202ENST00000367279 MYPNQ86TC9 1320 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 WNT10BO00744 389 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 PROSCO94903 275 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 KRT1P04264 644 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 DSG3P32926 999 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 MAN1A1P33908 653 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 TDRD10Q5VZ19 366 aaKnown RBP13.09□□□□□ -0.31
PTPN7-202ENST00000367279 SNRNP48Q6IEG0 339 aaKnown RBP13.09□□□□□ -0.31
PTPN7-202ENST00000367279 NIM1KQ8IY84 436 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 CCDC89Q8N998 374 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
PTPN7-202ENST00000367279 TMEM109Q9BVC6 243 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 ATP6V0A4Q9HBG4 840 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-202ENST00000367279 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
PTPN7-202ENST00000367279 SLC1A1P43005 524 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 NEDD9Q14511 834 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 PRAMEF18Q5VWM3 479 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 MFSD5Q6N075 450 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 DCUN1D2Q6PH85 259 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-202ENST00000367279 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 PRCCQ92733 491 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-202ENST00000367279 TACO1Q9BSH4 297 aaKnown RBP13.09□□□□□ -0.31
PTPN7-202ENST00000367279 UMODL1Q5DID0 1318 aa13.09□□□□□ -0.31
PTPN7-202ENST00000367279 TP73O15350 636 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 PIAS1O75925 651 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 PSAPP07602 524 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 TCF4P15884 667 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 PSMC4P43686 418 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 BPIFB4P59827 614 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 GCNT1Q02742 428 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 ZBTB33Q86T24 672 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 KIRREL3Q8IZU9 778 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 C4orf33Q8N1A6 199 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 TTLL6Q8N841 843 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 RBBP8NLQ8NC74 664 aaPredicted RBP13.08□□□□□ -0.31
PTPN7-202ENST00000367279 TRIM11Q96F44 468 aa13.08□□□□□ -0.31
PTPN7-202ENST00000367279 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.31
PTPN7-202ENST00000367279 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-202ENST00000367279 MAGEA4P43358 317 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 RPL7AP62424 266 aaKnown RBP13.08□□□□□ -0.32
PTPN7-202ENST00000367279 GPS1Q13098 491 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 ENOSF1Q7L5Y1 443 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 GLIS1Q8NBF1 620 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 FAM81BQ96LP2 452 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 MSTO1Q9BUK6 570 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 PITPNM3Q9BZ71 974 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 FHDC1Q9C0D6 1143 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-202ENST00000367279 CXorf56Q9H5V9 222 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 MRPL47Q9HD33 250 aaKnown RBP13.08□□□□□ -0.32
PTPN7-202ENST00000367279 JPH1Q9HDC5 661 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-202ENST00000367279 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 KLHL14Q9P2G3 628 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 PTPRJQ12913 1337 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 K7ERI5 159 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 DGAT1O75907 488 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 IVDP26440 423 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 ARSEP51690 589 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 SCARA5Q6ZMJ2 495 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 ANKS1BQ7Z6G8 1248 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 TEX2Q8IWB9 1127 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 MCPH1Q8NEM0 835 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 KIF9Q9HAQ2 790 aa13.08□□□□□ -0.32
PTPN7-202ENST00000367279 XPNPEP1Q9NQW7 623 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms