RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CACNB1Q02641 598 aaPredicted RBP16.15■□□□□ 0.18
CTSD-202ENST00000367196 PRKCQQ04759 706 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 YWHAHQ04917 246 aaPredicted RBP16.15■□□□□ 0.18
CTSD-202ENST00000367196 MRPL58Q14197 206 aaKnown RBP16.15■□□□□ 0.18
CTSD-202ENST00000367196 ARSHQ5FYA8 562 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 IQCEQ6IPM2 695 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 CD302Q8IX05 232 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 LEMD2Q8NC56 503 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 RAD54LQ92698 747 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 DDX12PQ92771 950 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 KIF12Q96FN5 646 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 HCFC1R1Q9NWW0 138 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 TUBGCP4Q9UGJ1 667 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 AFF4Q9UHB7 1163 aaKnown RBP16.15■□□□□ 0.18
CTSD-202ENST00000367196 FBXL5Q9UKA1 691 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 TBX20Q9UMR3 447 aa16.15■□□□□ 0.18
CTSD-202ENST00000367196 MIA3Q5JRA6 1907 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 NPHP3-ACAD11A0A0J9YXS1 232 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 TTC26A0AVF1 554 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 OGTO15294 1046 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 TRAK2O60296 914 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 TBC1D4O60343 1298 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 ECI2O75521 394 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 MICAL2O94851 1124 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 PIGRP01833 764 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 PLCG1P19174 1290 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 STARD6P59095 220 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 GPC5P78333 572 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 DHX8Q14562 1220 aaKnown RBP16.14■□□□□ 0.17
CTSD-202ENST00000367196 SEZ6Q53EL9 994 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 ZC3H14Q6PJT7 736 aaKnown RBP16.14■□□□□ 0.17
CTSD-202ENST00000367196 PDZD4Q76G19 769 aaPredicted RBP16.14■□□□□ 0.17
CTSD-202ENST00000367196 FRMD5Q7Z6J6 570 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 USP37Q86T82 979 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 PJA1Q8NG27 643 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 LARP4BQ92615 738 aaKnown RBP16.14■□□□□ 0.17
CTSD-202ENST00000367196 SEMA4AQ9H3S1 761 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 RPF1Q9H9Y2 349 aaKnown RBP16.14■□□□□ 0.17
CTSD-202ENST00000367196 INSL5Q9Y5Q6 135 aa16.14■□□□□ 0.17
CTSD-202ENST00000367196 NOTCH4Q99466 2003 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
CTSD-202ENST00000367196 M0QZQ0 153 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 TXLNAP40222 546 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 PLD1Q13393 1074 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 SF3A1Q15459 793 aaKnown RBP16.13■□□□□ 0.17
CTSD-202ENST00000367196 MLF2Q15773 248 aaPredicted RBP16.13■□□□□ 0.17
CTSD-202ENST00000367196 CYP4A22Q5TCH4 519 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 KRI1Q8N9T8 703 aaKnown RBP16.13■□□□□ 0.17
CTSD-202ENST00000367196 ING5Q8WYH8 240 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 KXD1Q9BQD3 176 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 MSTO1Q9BUK6 570 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 ZHX3Q9H4I2 956 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 CCDC39Q9UFE4 941 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 FAM186AA6NE01 2351 aa16.13■□□□□ 0.17
CTSD-202ENST00000367196 RIF1Q5UIP0 2472 aaKnown RBP16.12■□□□□ 0.17
CTSD-202ENST00000367196 PTPRZ1P23471 2315 aaPredicted RBP16.12■□□□□ 0.17
CTSD-202ENST00000367196 KANSL1LA0AUZ9 987 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 MEFVO15553 781 aaPredicted RBP16.12■□□□□ 0.17
CTSD-202ENST00000367196 OAZ2O95190 189 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 MAGEA9P43362 315 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 ADCY1Q08828 1119 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 MCM6Q14566 821 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 KARSQ15046 597 aaKnown RBP16.12■□□□□ 0.17
CTSD-202ENST00000367196 SPECC1Q5M775 1068 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 DSTYKQ6XUX3 929 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 MAP4K3Q8IVH8 894 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 BEST2Q8NFU1 509 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 ELSPBP1Q96BH3 223 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 ZNF512Q96ME7 567 aaPredicted RBP16.12■□□□□ 0.17
CTSD-202ENST00000367196 CORO1BQ9BR76 489 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 RPP25Q9BUL9 199 aaKnown RBP16.12■□□□□ 0.17
CTSD-202ENST00000367196 BCO2Q9BYV7 579 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 OSBPL6Q9BZF3 934 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 CCSER1Q9C0I3 900 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 ASAH2Q9NR71 780 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 BLOC1S4Q9NUP1 217 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 STK17AQ9UEE5 414 aa16.12■□□□□ 0.17
CTSD-202ENST00000367196 OR6C75A6NL08 312 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 DCNP07585 359 aaKnown RBP16.11■□□□□ 0.17
CTSD-202ENST00000367196 ODC1P11926 461 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 TNFSF9P41273 254 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 AARSP49588 968 aaKnown RBP eCLIP16.11■□□□□ 0.17
CTSD-202ENST00000367196 GTF2BQ00403 316 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
CTSD-202ENST00000367196 ZBTB6Q15916 424 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 ENOX2Q16206 610 aaKnown RBP16.11■□□□□ 0.17
CTSD-202ENST00000367196 SLC5A9Q2M3M2 681 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 SLC44A4Q53GD3 710 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 SLFN12LQ6IEE8 588 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 ASCL5Q7RTU5 278 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 DNASE1L2Q92874 299 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 HVCN1Q96D96 273 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 MCRS1Q96EZ8 462 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 ZFP14Q9HCL3 533 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 MRPS17Q9Y2R5 130 aaKnown RBP16.11■□□□□ 0.17
CTSD-202ENST00000367196 DERAQ9Y315 318 aa16.11■□□□□ 0.17
CTSD-202ENST00000367196 A0A0B4J269 797 aa16.1■□□□□ 0.17
CTSD-202ENST00000367196 LACTBL1A8MY62 500 aa16.1■□□□□ 0.17
CTSD-202ENST00000367196 NCAM2O15394 837 aa16.1■□□□□ 0.17
CTSD-202ENST00000367196 FAM189A1O60320 539 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms