RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 ZNF263O14978 683 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 SYN3O14994 580 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 HRO43593 1189 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 GDF9O60383 454 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 LRP3O75074 770 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 LARGE1O95461 756 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 RPA1P27694 616 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 CXCL12P48061 93 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 YARSP54577 528 aaKnown RBP12.54□□□□□ -0.4
MRPL55-212ENST00000366739 TWF1Q12792 350 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 MRPL58Q14197 206 aaKnown RBP12.54□□□□□ -0.4
MRPL55-212ENST00000366739 ZNF568Q3ZCX4 644 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 CTXN3Q4LDR2 81 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 IQCEQ6IPM2 695 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 PRR23CQ6ZRP0 262 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 APBB1IPQ7Z5R6 666 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-212ENST00000366739 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 ZSCAN18Q8TBC5 510 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-212ENST00000366739 DEPDC1BQ8WUY9 529 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 C18orf25Q96B23 403 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-212ENST00000366739 RSPRY1Q96DX4 576 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 IFT74Q96LB3 600 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 CCDC94Q9BW85 323 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-212ENST00000366739 TRPV4Q9HBA0 871 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 TOPORSQ9NS56 1045 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-212ENST00000366739 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
MRPL55-212ENST00000366739 SLC38A7Q9NVC3 462 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 NUB1Q9Y5A7 615 aa12.54□□□□□ -0.4
MRPL55-212ENST00000366739 TICRRQ7Z2Z1 1910 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 HEPACAM2A8MVW5 462 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 K7ERI5 159 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 JAK2O60674 1132 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 KCNA4P22459 653 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 SOX9P48436 509 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 EPHA5P54756 1037 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 TEAD2Q15562 447 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 CSRP2Q16527 193 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 ECM1Q16610 540 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 ME3Q16798 604 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 WDR44Q5JSH3 913 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 TPGS2Q68CL5 300 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 HEATR6Q6AI08 1181 aaKnown RBP12.53□□□□□ -0.4
MRPL55-212ENST00000366739 Q6ZS52 159 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-212ENST00000366739 MFSD6LQ8IWD5 586 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 SPEM1Q8N4L4 309 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 NSUN7Q8NE18 718 aaKnown RBP12.53□□□□□ -0.4
MRPL55-212ENST00000366739 ERMNQ8TAM6 284 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 GTF3C6Q969F1 213 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 ZNF512Q96ME7 567 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-212ENST00000366739 ACO2Q99798 780 aaKnown RBP12.53□□□□□ -0.4
MRPL55-212ENST00000366739 ASAH2Q9NR71 780 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
MRPL55-212ENST00000366739 CFAP47Q6ZTR5 3102 aa12.52□□□□□ -0.4
MRPL55-212ENST00000366739 SLC38A8A6NNN8 435 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 K7ESF4 209 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 MEFVO15553 781 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-212ENST00000366739 OR52Z1P0C646 297 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 KCNE1P15382 129 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 HOXC13P31276 330 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 PTGDRQ13258 359 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 RNF19BQ6ZMZ0 732 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 TAS1R3Q7RTX0 852 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 GPIHBP1Q8IV16 184 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 TMEM130Q8N3G9 435 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 SHKBP1Q8TBC3 707 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 KIFAP3Q92845 792 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 CHAMP1Q96JM3 812 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 SUSD3Q96L08 255 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 TARS2Q9BW92 718 aaKnown RBP12.52□□□□□ -0.41
MRPL55-212ENST00000366739 BHMT2Q9H2M3 363 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 SLITRK6Q9H5Y7 841 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 PTPRHQ9HD43 1115 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 C2orf42Q9NWW7 574 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 CNTN3Q9P232 1028 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 AFF4Q9UHB7 1163 aaKnown RBP12.52□□□□□ -0.41
MRPL55-212ENST00000366739 TRIP11Q15643 1979 aa12.52□□□□□ -0.41
MRPL55-212ENST00000366739 CCDC169A6NNP5 214 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 VNN2O95498 520 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 HARSP12081 509 aaKnown RBP12.51□□□□□ -0.41
MRPL55-212ENST00000366739 CPB1P15086 417 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
MRPL55-212ENST00000366739 MCM4P33991 863 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 CCT6AP40227 531 aaKnown RBP12.51□□□□□ -0.41
MRPL55-212ENST00000366739 NPTX2P47972 431 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 PEX3P56589 373 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 GUCY1B3Q02153 619 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 TRIM29Q14134 588 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 LRRC32Q14392 662 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 ZNF174Q15697 407 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 TXNDC11Q6PKC3 985 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 LONP2Q86WA8 852 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 LEMD2Q8NC56 503 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 TTC8Q8TAM2 541 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 CSGALNACT1Q8TDX6 532 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 DDX12PQ92771 950 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 TBC1D32Q96NH3 1257 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 ACAP3Q96P50 834 aa12.51□□□□□ -0.41
MRPL55-212ENST00000366739 MRPL4Q9BYD3 311 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms