RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 MBD3L4A6NDZ8 208 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MBD3L3A6NE82 208 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NOTOA8MTQ0 251 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PYCARD-AS1I3L0S3 204 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 F2RL2O00254 374 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PIP5K1BO14986 540 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZBED4O75132 1171 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NDST3O95803 873 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ABHD16AO95870 558 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TBX18O95935 607 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AMY1AP04745 511 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ATP1A3P13637 1013 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HNRNPLP14866 589 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ALOX15P16050 662 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HDCP19113 662 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 COL8A1P27658 744 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CST5P28325 142 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 THBS2P35442 1172 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ADD2P35612 726 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SREBF1P36956 1147 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PIK3CGP48736 1102 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CTXN1P60606 82 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NKX3-2P78367 333 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MYBPC2Q14324 1141 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 UBE3CQ15386 1083 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CCNG2Q16589 344 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ATP2B3Q16720 1220 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ALDH1L2Q3SY69 923 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SLC45A4Q5BKX6 768 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RALGPS1Q5JS13 557 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CCDC30Q5VVM6 783 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KANK2Q63ZY3 851 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LMBRD2Q68DH5 695 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GRAMD4Q6IC98 578 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SULT6B1Q6IMI4 303 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 USP17L6PQ6QN14 398 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KLHL17Q6TDP4 642 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 UNC13DQ70J99 1090 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TAS1R1Q7RTX1 841 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HEATR4Q86WZ0 1026 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PROSER1Q86XN7 944 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KRT73Q86Y46 540 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CPOQ8IVL8 374 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HERC6Q8IVU3 1022 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CCDC117Q8IWD4 279 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GLIS1Q8NBF1 620 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IPO4Q8TEX9 1081 aaKnown RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZNF480Q8WV37 535 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CASKIN2Q8WXE0 1202 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 HTRA1Q92743 480 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SDCCAG3Q96C92 435 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LRRC46Q96FV0 321 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 BARD1Q99728 777 aaKnown RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PDCD2LQ9BRP1 358 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CHCHD6Q9BRQ6 235 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LMAN2LQ9H0V9 348 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CHST8Q9H2A9 424 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 RXFP1Q9HBX9 757 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PREBQ9HCU5 417 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TNFRSF12AQ9NP84 129 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 A1CFQ9NQ94 594 aaKnown RBP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NKIRAS2Q9NYR9 191 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 SLAMF8Q9P0V8 285 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZNF212Q9UDV6 495 aa4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU6-1249P-201ENST00000363237 A0A0B4J269 797 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PLOD3O60568 738 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GPR32O75388 356 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TNFRSF6BO95407 300 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GASTP01350 101 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IGLV1-40P01703 118 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 AHSGP02765 367 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TXNP10599 105 aaKnown RBP4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KLRC1P26715 233 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GABRB3P28472 473 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 COPAP53621 1224 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ATXN1P54253 815 aaKnown RBP4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NR1H2P55055 460 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 WNT3AP56704 352 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ANTXR2P58335 489 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 DCAF7P61962 342 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 IL13RA1P78552 427 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 MXRA7P84157 204 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ZNF200P98182 395 aaPredicted RBP4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ATP8B2P98198 1209 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 CD83Q01151 205 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 UBE3AQ05086 875 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 EXOSC9Q06265 439 aaKnown RBP4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 PLCL1Q15111 1095 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LIN54Q6MZP7 749 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 ETV3LQ6ZN32 361 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 KRT28Q7Z3Y7 464 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 GALNT5Q7Z7M9 940 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 NLRX1Q86UT6 975 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 YAF2Q8IY57 180 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 LILRA2Q8N149 483 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 UCMAQ8WVF2 138 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 THAP4Q8WY91 577 aa4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TNPO1Q92973 898 aaKnown RBP4.26□□□□□ -1.73
RNU6-1249P-201ENST00000363237 TP53INP1Q96A56 240 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms