RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 NRDE2Q9H7Z3 1164 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 UBQLN1Q9UMX0 589 aaKnown RBP11.6□□□□□ -0.55
SNX6-201ENST00000362031 AGAP1Q9UPQ3 857 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 NUB1Q9Y5A7 615 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 ARHGEF15O94989 841 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 GJB5O95377 273 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 TNNC2P02585 160 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 MYOGP15173 224 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 RABGGTBP53611 331 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 GRIK3Q13003 919 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 UPP1Q16831 310 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 FILIP1LQ4L180 1135 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 GBP6Q6ZN66 633 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 RRAGAQ7L523 313 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 COLGALT2Q8IYK4 626 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 HASPINQ8TF76 798 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 MRFAP1L1Q96HT8 127 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 LSM14BQ9BX40 385 aaKnown RBP11.6□□□□□ -0.55
SNX6-201ENST00000362031 CWH43Q9H720 699 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 TRIOBPQ9H2D6 2365 aa11.6□□□□□ -0.55
SNX6-201ENST00000362031 GTPBP10A4D1E9 387 aaKnown RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 NT5C1B-RDH14C9J2C7 533 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 PHACTR2O75167 634 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 ASS1P00966 412 aaKnown RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 LINC00271P0C7V0 271 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 LRPAP1P30533 357 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 PIK3CAP42336 1068 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 KCNJ6P48051 423 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 FKBP15Q5T1M5 1219 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 USP37Q86T82 979 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 HERC6Q8IVU3 1022 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 BEST2Q8NFU1 509 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 CACTINQ8WUQ7 758 aaKnown RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 BCL7CQ8WUZ0 217 aaPredicted RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 GANQ9H2C0 597 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 SLC4A7Q9Y6M7 1214 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 I3L4J1 428 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 P4HA2O15460 535 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 STX10O60499 249 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 EFCAB14O75071 495 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 KIF4AO95239 1232 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 ATP2A2P16615 1042 aaKnown RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 CYP3A5P20815 502 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 HTRA4P83105 476 aaPredicted RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 TUSC3Q13454 348 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 KLHDC7AQ5VTJ3 777 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 TMC6Q7Z403 805 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 NT5DC4Q86YG4 428 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 ABI1Q8IZP0 508 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 SPC24Q8NBT2 197 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 KREMEN1Q96MU8 473 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 TTYH3Q9C0H2 523 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 ITGA11Q9UKX5 1188 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 PRG3Q9Y2Y8 225 aaPredicted RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 FHOD1Q9Y613 1164 aa11.59□□□□□ -0.55
SNX6-201ENST00000362031 MRPL42Q9Y6G3 142 aaKnown RBP11.59□□□□□ -0.55
SNX6-201ENST00000362031 XIRP2A4UGR9 3374 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 A0A1W2PQC6 194 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 PODXLO00592 558 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 CBFA2T2O43439 604 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 ZC3H11AO75152 810 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNX6-201ENST00000362031 GYPCP04921 128 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 TPM2P07951 284 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 SLC11A1P49279 550 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 FXR1P51114 621 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNX6-201ENST00000362031 AP3M2P53677 418 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 LILRA4P59901 499 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 NOP14P78316 857 aaKnown RBP11.58□□□□□ -0.56
SNX6-201ENST00000362031 RBP5P82980 135 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 RNASELQ05823 741 aaKnown RBP11.58□□□□□ -0.56
SNX6-201ENST00000362031 ARID5BQ14865 1188 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 IQCEQ6IPM2 695 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 CPLX3Q8WVH0 158 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 HPDLQ96IR7 371 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 NAA15Q9BXJ9 866 aaKnown RBP11.58□□□□□ -0.56
SNX6-201ENST00000362031 UBE2OQ9C0C9 1292 aaKnown RBP11.58□□□□□ -0.56
SNX6-201ENST00000362031 GPR88Q9GZN0 384 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 SDCBP2Q9H190 292 aa11.58□□□□□ -0.56
SNX6-201ENST00000362031 HCRTO43612 131 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 N4BP1O75113 896 aaKnown RBP11.57□□□□□ -0.56
SNX6-201ENST00000362031 CALCAP01258 141 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 GALTP07902 379 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 ASPAP45381 313 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 BRCC3P46736 316 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 RAP1GAPP47736 663 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 CDH8P55286 799 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 TBX2Q13207 712 aaPredicted RBP11.57□□□□□ -0.56
SNX6-201ENST00000362031 TRPC3Q13507 836 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 WDR72Q3MJ13 1102 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 E4F1Q66K89 784 aaPredicted RBP11.57□□□□□ -0.56
SNX6-201ENST00000362031 SPECC1LQ69YQ0 1117 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 SCARA5Q6ZMJ2 495 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 FAM43BQ6ZT52 329 aaPredicted RBP11.57□□□□□ -0.56
SNX6-201ENST00000362031 URGCPQ8TCY9 931 aa11.57□□□□□ -0.56
SNX6-201ENST00000362031 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms