RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FAM161BQ96MY7 647 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 TMEM121Q9BTD3 319 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 DCLK3Q9C098 648 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 ADAM7Q9H2U9 754 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 MRPL47Q9HD33 250 aaKnown RBP6.96□□□□□ -1.3
CSDE1-203ENST00000358528 WHRNQ9P202 907 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 CIB2O75838 187 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 MAP3K6O95382 1288 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 PHBP35232 272 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 RPA3P35244 121 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-203ENST00000358528 CCNHP51946 323 aaPredicted RBP6.96□□□□□ -1.3
CSDE1-203ENST00000358528 ARFIP2P53365 341 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 DRG2P55039 364 aaKnown RBP6.96□□□□□ -1.3
CSDE1-203ENST00000358528 MPP2Q14168 576 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 BMT2Q1RMZ1 405 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 FOXR2Q6PJQ5 311 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 VSTM1Q6UX27 236 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 NLRP9Q7RTR0 991 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 CCDC125Q86Z20 511 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 DEPTORQ8TB45 409 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 MORC4Q8TE76 937 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 HSPH1Q92598 858 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 VTI1AQ96AJ9 217 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 GBP5Q96PP8 586 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 ZNF341Q9BYN7 854 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 SLC13A1Q9BZW2 595 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 EPB41L4BQ9H329 900 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 BATF3Q9NR55 127 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 PPARGC1AQ9UBK2 798 aaKnown RBP6.96□□□□□ -1.3
CSDE1-203ENST00000358528 GABBR1Q9UBS5 961 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 SUGT1Q9Y2Z0 365 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 MAD1L1Q9Y6D9 718 aa6.96□□□□□ -1.3
CSDE1-203ENST00000358528 I3L4J1 428 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 ECE2O60344 883 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 PSMD10O75832 226 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 GZMAP12544 262 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 GYS1P13807 737 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 ALDH1B1P30837 517 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 SSTR1P30872 391 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 POLGP54098 1239 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 CAV1Q03135 178 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 KDSRQ06136 332 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 CFAP157Q5JU67 520 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 KCNT1Q5JUK3 1230 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 EMC10Q5UCC4 262 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 CASC4Q6P4E1 433 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 SP8Q8IXZ3 490 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 SPDYE1Q8NFV5 336 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 MCEEQ96PE7 176 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 RMDN3Q96TC7 470 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 TRIM55Q9BYV6 548 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 DNPEPQ9ULA0 475 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 SLC12A4Q9UP95 1085 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 A0A1W2PPM1 405 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 H7C0C1 242 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 NFIBO00712 420 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 TJP3O95049 919 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 PECAM1P16284 738 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 FOXN2P32314 431 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 ATP5OP48047 213 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 BPIFB4P59827 614 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 LMNB2Q03252 620 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 MKRN3Q13064 507 aaKnown RBP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 FASTKD3Q14CZ7 662 aaKnown RBP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 RCN1Q15293 331 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 CYP4A22Q5TCH4 519 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 SWSAP1Q6NVH7 229 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 C3orf62Q6ZUJ4 267 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 DNAJC9Q8WXX5 260 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 GRAMD1AQ96CP6 724 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 PRMT6Q96LA8 375 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 FHDC1Q9C0D6 1143 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 HEY2Q9UBP5 337 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 CHMP2BQ9UQN3 213 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 FRMPD4Q14CM0 1322 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 ZMYM2Q9UBW7 1377 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 TOGARAM1Q9Y4F4 1720 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 A0A1B0GUL6 1792 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 BCORQ6W2J9 1755 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 UBR2Q8IWV8 1755 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 OPHN1O60890 802 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 LGR5O75473 907 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 STAM2O75886 525 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 HLA-DRAP01903 254 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 UBTFL6P0CB48 400 aaPredicted RBP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 CHRNB2P17787 502 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 ADRA1DP25100 572 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 HSPA1LP34931 641 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 RARRES1P49788 294 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 PEX5P50542 639 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 HIF1AQ16665 826 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 CDO1Q16878 200 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 THEMIS2Q5TEJ8 643 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 WDR78Q5VTH9 848 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 CEP128Q6ZU80 1094 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 AGGF1Q8N302 714 aaeCLIP6.95□□□□□ -1.3
CSDE1-203ENST00000358528 PPM1NQ8N819 430 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 MXRA8Q9BRK3 442 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 SMYD3Q9H7B4 428 aa6.95□□□□□ -1.3
CSDE1-203ENST00000358528 FAM198AQ9UFP1 575 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms