RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 NSUN6Q8TEA1 469 aaKnown RBP18.08■□□□□ 0.48
COL27A1-201ENST00000356083 KAT2BQ92831 832 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 TNIP3Q96KP6 325 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 YME1L1Q96TA2 773 aa18.08■□□□□ 0.48
COL27A1-201ENST00000356083 C3orf70A6NLC5 250 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 AIM2O14862 343 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 CAND2O75155 1236 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 PLEKHA8P1O95397 391 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 KPNA1P52294 538 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 CDH18Q13634 790 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 AMHR2Q16671 573 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 ZSWIM6Q9HCJ5 1215 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 POLG2Q9UHN1 485 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 FBXO10Q9UK96 956 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 AGO2Q9UKV8 859 aaKnown RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 LPIN1Q14693 890 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 INAQ16352 499 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 DDI2Q5TDH0 399 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 CAPRIN2Q6IMN6 1127 aaKnown RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 CACUL1Q86Y37 369 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 PADI4Q9UM07 663 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 EVPLLA8MZ36 301 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 PARVAQ9NVD7 372 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 CYP27B1O15528 508 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 USP10Q14694 798 aaKnown RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 E9PBE3 544 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 NR3C1P04150 777 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 TXNP10599 105 aaKnown RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 SLC7A14Q8TBB6 771 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 COQ6Q9Y2Z9 468 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 SPACA6W5XKT8 324 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 NCF1BA6NI72 391 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 NCF1CA8MVU1 366 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 STRNO43815 780 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 NCF1P14598 390 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 RGS4P49798 205 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 MACC1Q6ZN28 852 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 CEP95Q96GE4 821 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 EHD2Q9NZN4 543 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 SNX9Q9Y5X1 595 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 BLMP54132 1417 aaPredicted RBP18.07■□□□□ 0.48
COL27A1-201ENST00000356083 A2MP01023 1474 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
COL27A1-201ENST00000356083 PCDH8O95206 1070 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 PTPN7P35236 360 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 ACOT2P49753 483 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 VSNL1P62760 191 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 KCNH2Q12809 1159 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 NFIL3Q16649 462 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 PNMA5Q96PV4 448 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 RSPH9Q9H1X1 276 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-201ENST00000356083 POTECB2RU33 542 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-201ENST00000356083 LRRC63Q05C16 580 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 PIF1Q9H611 641 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 DDX56Q9NY93 547 aaKnown RBP18.06■□□□□ 0.48
COL27A1-201ENST00000356083 MRPL39Q9NYK5 338 aaKnown RBP18.06■□□□□ 0.48
COL27A1-201ENST00000356083 CDH2P19022 906 aaPredicted RBP18.06■□□□□ 0.48
COL27A1-201ENST00000356083 MASTLQ96GX5 879 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 KIAA1586Q9HCI6 787 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 SYNCRIPO60506 623 aaKnown RBP18.06■□□□□ 0.48
COL27A1-201ENST00000356083 ADD2P35612 726 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 RAD23BP54727 409 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 SFR1Q86XK3 245 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 ECSITQ9BQ95 431 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 RAB6BQ9NRW1 208 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 PAGE5Q96GU1 130 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 FAM49BQ9NUQ9 324 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 SPATA2Q9UM82 520 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 SDK1Q7Z5N4 2213 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 H2AFYO75367 372 aaKnown RBP18.06■□□□□ 0.48
COL27A1-201ENST00000356083 HAUS5O94927 633 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 UNC45BQ8IWX7 931 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 ANTXR1Q9H6X2 564 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 MTMR6Q9Y217 621 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 POLR1DQ9Y2S0 133 aa18.06■□□□□ 0.48
COL27A1-201ENST00000356083 LRRC14BA6NHZ5 514 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 SNAP23O00161 211 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 ST13P50502 369 aaKnown RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 CAMK2GQ13555 558 aaPredicted RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 KLHL25Q9H0H3 589 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 POU1F1P28069 291 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 SEPT2Q15019 361 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 CNGA2Q16280 664 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 PGS1Q32NB8 556 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 ADI1Q9BV57 179 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 PAIP2BQ9ULR5 123 aaKnown RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 AGAP1Q9UPQ3 857 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 FGFR4P22455 802 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 PMS2P54278 862 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 KCNB1Q14721 858 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 GALNTL6Q49A17 601 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 OSBPL1AQ9BXW6 950 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 ASS1P00966 412 aaKnown RBP18.05■□□□□ 0.48
COL27A1-201ENST00000356083 ALDH9A1P49189 494 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 NANOGNBQ7Z5D8 188 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 WNK4Q96J92 1243 aa18.05■□□□□ 0.48
COL27A1-201ENST00000356083 FRMD6Q96NE9 622 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms