RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PHOX2BQ99453 314 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 MSTO1Q9BUK6 570 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 EPS15L1Q9UBC2 864 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 KCNG1Q9UIX4 513 aa18.21■□□□□ 0.51
PDLIM7-201ENST00000355572 SPTLC2O15270 562 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 ABLIM3O94929 683 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 F13A1P00488 732 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 OR4Q2P0C623 313 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 STAT6P42226 847 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 AARSP49588 968 aaKnown RBP eCLIP18.2■□□□□ 0.54e-9■■□□□ 11.9
PDLIM7-201ENST00000355572 ARPP19P56211 112 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 PPP2R3AQ06190 1150 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 SLC5A9Q2M3M2 681 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 CYP26C1Q6V0L0 522 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 ANKS3Q6ZW76 656 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 SV2BQ7L1I2 683 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 ACSF2Q96CM8 615 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 FAM122AQ96E09 287 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 FAM212AQ96EL1 285 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 RPF1Q9H9Y2 349 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 ARIH1Q9Y4X5 557 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 NUB1Q9Y5A7 615 aa18.2■□□□□ 0.5
PDLIM7-201ENST00000355572 SYN3O14994 580 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 ZSCAN22P10073 491 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 LAMP2P13473 410 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 NPR3P17342 541 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 CASP1P29466 404 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 CDR1P51861 262 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 TCF15Q12870 199 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 LIN9Q5TKA1 542 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 SPATA1Q5VX52 437 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 CWF19L1Q69YN2 538 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 TMEM105Q8N8V8 129 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 MFSD14AQ96MC6 490 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 TMEM209Q96SK2 561 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 CRISPLD1Q9H336 500 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 UBQLN1Q9UMX0 589 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 POLIQ9UNA4 740 aa18.19■□□□□ 0.5
PDLIM7-201ENST00000355572 COL4A2P08572 1712 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 M0QZQ0 153 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 TRAPPC3O43617 180 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 HNRNPA1P09651 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 IDEP14735 1019 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 FSHRP23945 695 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 AVPR2P30518 371 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 HOXA9P31269 272 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 HOXD13P35453 343 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 NHLH1Q02575 133 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 TDGQ13569 410 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 HTR4Q13639 388 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 CTXN3Q4LDR2 81 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 ADALQ6DHV7 355 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 PDXDC1Q6P996 788 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 UBALD2Q8IYN6 164 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 SLC44A3Q8N4M1 653 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 ING5Q8WYH8 240 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 FGF14Q92915 247 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 MRPL44Q9H9J2 332 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 DPP7Q9UHL4 492 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 AGO2Q9UKV8 859 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 PCDHB8Q9UN66 801 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 DUSP12Q9UNI6 340 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
PDLIM7-201ENST00000355572 ANO9A1A5B4 782 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 ANHXE9PGG2 379 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 PI15O43692 258 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 PPP6R2O75170 966 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 PRPF6O94906 941 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 GCNT3O95395 438 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 CYP3A5P20815 502 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 CCR2P41597 374 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 L1TD1Q5T7N2 865 aaKnown RBP18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 C9orf57Q5W0N0 161 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 PARM1Q6UWI2 310 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 RNF19BQ6ZMZ0 732 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 CCDC73Q6ZRK6 1079 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 ZNF461Q8TAF7 563 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 FGF13Q92913 245 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 SAAL1Q96ER3 474 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 PANK4Q9NVE7 773 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 NUMBLQ9Y6R0 609 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 OBSL1O75147 1896 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 DENND4CQ5VZ89 1909 aa18.17■□□□□ 0.5
PDLIM7-201ENST00000355572 ARHGEF37A1IGU5 675 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 KRBA1A5PL33 1030 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 GOLGA8IPA6NC78 632 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 GOLGA8JA6NMD2 632 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 PIRO00625 290 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 YEATS4O95619 227 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 CFHP08603 1231 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 TXLNAP40222 546 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 DNM1Q05193 864 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 ELMSAN1Q6PJG2 1045 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 NPAS3Q8IXF0 933 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 TTC9BQ8N6N2 239 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 DHX58Q96C10 678 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms