RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TADA1Q96BN2 335 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 TUFT1Q9NNX1 390 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 UVRAGQ9P2Y5 699 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 MARCOQ9UEW3 520 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-201ENST00000355497 NEU2Q9Y3R4 380 aa15.61■□□□□ 0.09
LMX1B-201ENST00000355497 AIM2O14862 343 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 EIF3HO15372 352 aaKnown RBP eCLIP15.6■□□□□ 0.09
LMX1B-201ENST00000355497 CDC27P30260 824 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 PTK7Q13308 1070 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 CYLC2Q14093 348 aaPredicted RBP15.6■□□□□ 0.09
LMX1B-201ENST00000355497 STILQ15468 1287 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 AGBL1Q96MI9 1066 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 CCT7Q99832 543 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 THTPAQ9BU02 230 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 USE1Q9NZ43 259 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 ZNF185O15231 689 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 CDH16O75309 829 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 APRTP07741 180 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 CLK1P49759 484 aaKnown RBP15.6■□□□□ 0.09
LMX1B-201ENST00000355497 SLC30A9Q6PML9 568 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 CCT8L2Q96SF2 557 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 ACAD9Q9H845 621 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 DBR1Q9UK59 544 aaKnown RBP15.6■□□□□ 0.09
LMX1B-201ENST00000355497 SESN1Q9Y6P5 492 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 ATP7BP35670 1465 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 EYA4O95677 639 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 TMED10P49755 219 aaKnown RBP15.6■□□□□ 0.09
LMX1B-201ENST00000355497 PLOD1Q02809 727 aaPredicted RBP15.6■□□□□ 0.09
LMX1B-201ENST00000355497 TTC39BQ5VTQ0 682 aaPredicted RBP15.6■□□□□ 0.09
LMX1B-201ENST00000355497 HDDC2Q7Z4H3 204 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 C4orf33Q8N1A6 199 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 DNAJC9Q8WXX5 260 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 MS4A14Q96JA4 679 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 PPP1R2P1Q96PQ5 205 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 MTA3Q9BTC8 594 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 WDR35Q9P2L0 1181 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 SYNMO15061 1565 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 TOMM70O94826 608 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 KCNK10P57789 538 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 KCNB1Q14721 858 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 TRIP10Q15642 601 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 IYDQ6PHW0 289 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 USP33Q8TEY7 942 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 TDP2O95551 362 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 PRKCBP05771 671 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 EPHA7Q15375 998 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 SHCBP1Q8NEM2 672 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 WDR48Q8TAF3 677 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 TRPC7Q9HCX4 862 aa15.6■□□□□ 0.09
LMX1B-201ENST00000355497 PHF20L1A8MW92 1017 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 EEF2KO00418 725 aaKnown RBP15.59■□□□□ 0.09
LMX1B-201ENST00000355497 CLASP2O75122 1294 aaKnown RBP15.59■□□□□ 0.09
LMX1B-201ENST00000355497 CYP2C19P33261 490 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 ATXN3P54252 364 aaPredicted RBP15.59■□□□□ 0.09
LMX1B-201ENST00000355497 GPSM2P81274 684 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 QRICH1Q2TAL8 776 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 LMBRD2Q68DH5 695 aaPredicted RBP15.59■□□□□ 0.09
LMX1B-201ENST00000355497 IFNEQ86WN2 208 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 XPO6Q96QU8 1125 aaKnown RBP15.59■□□□□ 0.09
LMX1B-201ENST00000355497 TIPINQ9BVW5 301 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 SRLQ86TD4 932 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 FLCNQ8NFG4 579 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 SEC16BQ96JE7 1060 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 RAB6BQ9NRW1 208 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 MROH7-TTC4A0A0A0MT08 1334 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 YWHABP31946 246 aaKnown RBP15.59■□□□□ 0.09
LMX1B-201ENST00000355497 ARL4DP49703 201 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 HPCAP84074 193 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 ATP2C1P98194 919 aaPredicted RBP15.59■□□□□ 0.09
LMX1B-201ENST00000355497 CPA5Q8WXQ8 436 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 ADAM33Q9BZ11 813 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 SLC30A1Q9Y6M5 507 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 ECE2O60344 883 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 ST8SIA6P61647 398 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 DIS3LQ8TF46 1054 aaKnown RBP15.59■□□□□ 0.09
LMX1B-201ENST00000355497 ERP27Q96DN0 273 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 MED15Q96RN5 788 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 APEX2Q9UBZ4 518 aa15.59■□□□□ 0.09
LMX1B-201ENST00000355497 PYGMP11217 842 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 TCN1P20061 433 aaPredicted RBP15.58■□□□□ 0.09
LMX1B-201ENST00000355497 PSMA3P25788 255 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 SPRP35270 261 aaPredicted RBP15.58■□□□□ 0.09
LMX1B-201ENST00000355497 WDR24Q96S15 920 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 STK33Q9BYT3 514 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 TDRD3Q9H7E2 651 aaKnown RBP15.58■□□□□ 0.09
LMX1B-201ENST00000355497 RIC8BQ9NVN3 520 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 LSM7Q9UK45 103 aaKnown RBP15.58■□□□□ 0.09
LMX1B-201ENST00000355497 ADGRA2Q96PE1 1338 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 RFX7Q2KHR2 1363 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 PTCH1Q13635 1447 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 XPO1O14980 1071 aaKnown RBP15.58■□□□□ 0.09
LMX1B-201ENST00000355497 ALDH1A1P00352 501 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 SERPINB3P29508 390 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 SOAT1P35610 550 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 TRIP4Q15650 581 aaPredicted RBP15.58■□□□□ 0.09
LMX1B-201ENST00000355497 FBXW10Q5XX13 1052 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 SETD3Q86TU7 594 aaPredicted RBP15.58■□□□□ 0.09
LMX1B-201ENST00000355497 P3H2Q8IVL5 708 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 CALML6Q8TD86 181 aa15.58■□□□□ 0.09
LMX1B-201ENST00000355497 TUBGCP3Q96CW5 907 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms