RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 PTGISQ16647 500 aa8.4□□□□□ -1.06
HTT-201ENST00000355072 IRGCQ6NXR0 463 aa8.4□□□□□ -1.06
HTT-201ENST00000355072 C17orf53Q8N3J3 647 aaPredicted RBP8.4□□□□□ -1.06
HTT-201ENST00000355072 RDH13Q8NBN7 331 aa8.4□□□□□ -1.06
HTT-201ENST00000355072 MPP4Q96JB8 637 aa8.4□□□□□ -1.06
HTT-201ENST00000355072 MTMR12Q9C0I1 747 aa8.4□□□□□ -1.06
HTT-201ENST00000355072 EFCAB1Q9HAE3 211 aa8.4□□□□□ -1.06
HTT-201ENST00000355072 NCOA5Q9HCD5 579 aaKnown RBP8.4□□□□□ -1.06
HTT-201ENST00000355072 HERC5Q9UII4 1024 aaKnown RBP8.4□□□□□ -1.06
HTT-201ENST00000355072 PDXKO00764 312 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 ATF6P18850 670 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 SOX5P35711 763 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 RCN1Q15293 331 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 SPATS1Q496A3 300 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 KIAA0408Q6ZU52 694 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 GJD3Q8N144 294 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 CYGBQ8WWM9 190 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 KRT84Q9NSB2 600 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 PALMO75781 387 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 SEC31AO94979 1220 aaKnown RBP8.4□□□□□ -1.07
HTT-201ENST00000355072 EIF4A2Q14240 407 aaKnown RBP8.4□□□□□ -1.07
HTT-201ENST00000355072 ZNF564Q8TBZ8 553 aaPredicted RBP8.4□□□□□ -1.07
HTT-201ENST00000355072 TTC7AQ9ULT0 858 aaPredicted RBP8.4□□□□□ -1.07
HTT-201ENST00000355072 WFS1O76024 890 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 LCA5LO95447 670 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 PDIA5Q14554 519 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 ABHD8Q96I13 439 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 SCN8AQ9UQD0 1980 aa8.4□□□□□ -1.07
HTT-201ENST00000355072 RNF103O00237 685 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 ARIH2O95376 493 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 MSH3P20585 1137 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 FAF2Q96CS3 445 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 STK39Q9UEW8 545 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 GGA1Q9UJY5 639 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 OSBPP22059 807 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 CYP4A11Q02928 519 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 CYP4A22Q5TCH4 519 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 TTC30AQ86WT1 665 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 TTC30BQ8N4P2 665 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 XXYLT1Q8NBI6 393 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 MRRFQ96E11 262 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 MROH7-TTC4A0A0A0MT08 1334 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 KLRF2D3W0D1 207 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 KCNT1Q5JUK3 1230 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 LRRC2Q9BYS8 371 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 EHD1Q9H4M9 534 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 SERPINB13Q9UIV8 391 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 POTECB2RU33 542 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 MSL3P1P0C860 447 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 NQO1P15559 274 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 PSMC6P62333 389 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 VSNL1P62760 191 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 NLRP10Q86W26 655 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 FOPNLQ96NB1 174 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 NRBP2Q9NSY0 501 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 TBC1D22BQ9NU19 505 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 NCKIPSDQ9NZQ3 722 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 H2AFY2Q9P0M6 372 aaPredicted RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 CCDC162PA2VCL2 907 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 WWP2O00308 870 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 IRAK1P51617 712 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 ENPEPQ07075 957 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 HAVCR1Q96D42 359 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 ERP44Q9BS26 406 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 TSPOAP1O95153 1857 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 CSE1LP55060 971 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 TRIP10Q15642 601 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 TMEM237Q96Q45 408 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 ADGRF5Q8IZF2 1346 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 PABPC1P11940 636 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 GNA13Q14344 377 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 C11orf63Q6NUN7 778 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 ADAMTS1Q9UHI8 967 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 OPLAHO14841 1288 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 DNAJC6O75061 913 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 RRM2P31350 389 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 PLA2G4AP47712 749 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 AP3S2P59780 193 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 TSHZ3Q63HK5 1081 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 MNTQ99583 582 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 KANSL2Q9H9L4 492 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 LZTS1Q9Y250 596 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 USTQ9Y2C2 406 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 IPPQ9Y573 584 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 BCORL1Q5H9F3 1711 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 ZNF521Q96K83 1311 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 DLGAP3O95886 979 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 RPL5P46777 297 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 ARHGEF16Q5VV41 709 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 CAMK1DQ8IU85 385 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 MYCBPAPQ8TBZ2 947 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 UBE2OQ9C0C9 1292 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 RUBCNLQ9H714 662 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 WBP4O75554 376 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 CYP2C9P11712 490 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 FDFT1P37268 417 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 PTGES3Q15185 160 aaKnown RBP8.39□□□□□ -1.07
HTT-201ENST00000355072 GALNT18Q6P9A2 607 aa8.39□□□□□ -1.07
HTT-201ENST00000355072 TRIM65Q6PJ69 517 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms