RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NR1H3Q13133 447 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 MED21Q13503 144 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 KAZNQ674X7 775 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 DPY19L2P1Q6NXN4 242 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 SPATA31D4Q6ZUB0 917 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 LRRC6Q86X45 466 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 TRIM42Q8IWZ5 723 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF34Q8IZ26 560 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 PPM1KQ8N3J5 372 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 TTC17Q96AE7 1141 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 PRR11Q96HE9 360 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CLPTM1LQ96KA5 538 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 PCIF1Q9H4Z3 704 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 TAS2R1Q9NYW7 299 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 PPARGC1AQ9UBK2 798 aaKnown RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 LNPEPQ9UIQ6 1025 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 TMCO1Q9UM00 188 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 NENFQ9UMX5 172 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 RPL26L1Q9UNX3 145 aaKnown RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF711Q9Y462 761 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 MYO3BQ8WXR4 1341 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ADAMTS7Q9UKP4 1686 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 SIGLEC16A6NMB1 481 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 STK10O94804 968 aaKnown RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 IFNB1P01574 187 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ANPEPP15144 967 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 VAV1P15498 845 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF76P36508 570 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CDK7P50613 346 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CAV1Q03135 178 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 DDB1Q16531 1140 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 MAPK6Q16659 721 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 GSTA3Q16772 222 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 TRMT1LQ7Z2T5 733 aaKnown RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CATSPER3Q86XQ3 398 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 MAP7D3Q8IWC1 876 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CCDC89Q8N998 374 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ATL2Q8NHH9 583 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 NR1H4Q96RI1 486 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ECSITQ9BQ95 431 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 SMYD3Q9H7B4 428 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ANAPC7Q9UJX3 599 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 GRID1Q9ULK0 1009 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 COL5A2P05997 1499 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-201ENST00000352993 ASTN1O14525 1302 aa8.08□□□□□ -1.12
BRCA1-201ENST00000352993 CHMP2AO43633 222 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 YY1P25490 414 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 CDK8P49336 464 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 PCNX4Q63HM2 1172 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 RGS9BPQ6ZS82 235 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 TTC7BQ86TV6 843 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 CLEC10AQ8IUN9 316 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 RBM12BQ8IXT5 1001 aaKnown RBP8.07□□□□□ -1.12
BRCA1-201ENST00000352993 ZBED8Q8IZ13 594 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 CCDC24Q8N4L8 307 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 NAT14Q8WUY8 206 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 JDP2Q8WYK2 163 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 CLMNQ96JQ2 1002 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 TSSK1BQ9BXA7 367 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 TMEM120AQ9BXJ8 343 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 LRRC19Q9H756 370 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 LRRC4BQ9NT99 713 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 ZNF148Q9UQR1 794 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SPATA31A5Q5VU36 1347 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 MROH7Q68CQ1 1323 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SPATA31A7Q8IWB4 1347 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 ATP2A1O14983 1001 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SLC16A3O15427 465 aaKnown RBP8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SUPT3HO75486 399 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 TMCC1O94876 653 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 OR6B1O95007 311 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SGPL1O95470 568 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 HOXD13P35453 343 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 GCLMP48507 274 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SH3BGRP55822 239 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-201ENST00000352993 BPIFB4P59827 614 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 NOP14P78316 857 aaKnown RBP8.07□□□□□ -1.12
BRCA1-201ENST00000352993 R3HDM1Q15032 1099 aaKnown RBP8.07□□□□□ -1.12
BRCA1-201ENST00000352993 PLEKHG4Q58EX7 1191 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SATL1Q86VE3 508 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 RILPQ96NA2 401 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 OSBPL8Q9BZF1 889 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 EBF3Q9H4W6 596 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 MANSC1Q9H8J5 431 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 LGALS13Q9UHV8 139 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 USP21Q9UK80 565 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 MINPP1Q9UNW1 487 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 NEU2Q9Y3R4 380 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 UMODL1Q5DID0 1318 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 CYP26A1O43174 497 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 POTEJP0CG39 1038 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 KITP10721 976 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 MAN1A1P33908 653 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SLC12A3P55017 1021 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 Q4G0T1 1027 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 BBOF1Q8ND07 529 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 SMC1BQ8NDV3 1235 aa8.07□□□□□ -1.12
BRCA1-201ENST00000352993 PPP2R3CQ969Q6 453 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms