RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.72■■□□□ 1.23
TRIM3-201ENST00000345851 SIGLEC16A6NMB1 481 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 CAPN9O14815 690 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 SERPINB4P48594 390 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 SPIRE1Q08AE8 756 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 TATDN1Q6P1N9 297 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 NLRP9Q7RTR0 991 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 C12orf50Q8NA57 414 aaPredicted RBP22.71■■□□□ 1.23
TRIM3-201ENST00000345851 KAT5Q92993 513 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 CCDC77Q9BR77 488 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 ANO3Q9BYT9 981 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 RGPD3A6NKT7 1758 aaPredicted RBP22.71■■□□□ 1.23
TRIM3-201ENST00000345851 RGPD4Q7Z3J3 1758 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 SMCHD1A6NHR9 2005 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 EDF1O60869 148 aaKnown RBP22.71■■□□□ 1.23
TRIM3-201ENST00000345851 FAM13AO94988 1023 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 SKIP12755 728 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 SPARCL1Q14515 664 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 KPNB1Q14974 876 aaKnown RBP22.71■■□□□ 1.23
TRIM3-201ENST00000345851 QRICH1Q2TAL8 776 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 ERMNQ8TAM6 284 aa22.71■■□□□ 1.23
TRIM3-201ENST00000345851 CADM1Q9BY67 442 aaKnown RBP22.71■■□□□ 1.23
TRIM3-201ENST00000345851 ZNF70Q9UC06 446 aaPredicted RBP22.71■■□□□ 1.23
TRIM3-201ENST00000345851 RRM1P23921 792 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 RPA1P27694 616 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 ERFP50548 548 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 ARHGAP22Q7Z5H3 698 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 HERPUD2Q9BSE4 406 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 FRMD4BQ9Y2L6 1034 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 EXOC1LA0A1B0GW35 172 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 SGPL1O95470 568 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 EGFRP00533 1210 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 UBTFL6P0CB48 400 aaPredicted RBP22.7■■□□□ 1.22
TRIM3-201ENST00000345851 KRT15P19012 456 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 RPA3P35244 121 aaPredicted RBP22.7■■□□□ 1.22
TRIM3-201ENST00000345851 ACSBG2Q5FVE4 666 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 ACER1Q8TDN7 264 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 ZNF653Q96CK0 615 aa22.7■■□□□ 1.22
TRIM3-201ENST00000345851 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.7■■□□□ 1.22
TRIM3-201ENST00000345851 ZBTB5O15062 677 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 CA4P22748 312 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 CXCL9Q07325 125 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 RFX8Q6ZV50 586 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 MAML1Q92585 1016 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 TRAIPQ9BWF2 469 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 TRABDQ9H4I3 376 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 RABGAP1Q9Y3P9 1069 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 WDR91A4D1P6 747 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 TCEA3O75764 348 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 NDUFB10O96000 172 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 LMNAP02545 664 aaKnown RBP22.69■■□□□ 1.22
TRIM3-201ENST00000345851 VIL1P09327 827 aaKnown RBP22.69■■□□□ 1.22
TRIM3-201ENST00000345851 BCRP11274 1271 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 OVGP1Q12889 678 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 SLFN12Q8IYM2 578 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 TMOD2Q9NZR1 351 aa22.69■■□□□ 1.22
TRIM3-201ENST00000345851 FGFR1P11362 822 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 SLC1A5Q15758 541 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 PKN2Q16513 984 aaKnown RBP22.68■■□□□ 1.22
TRIM3-201ENST00000345851 GPATCH4Q5T3I0 446 aaKnown RBP22.68■■□□□ 1.22
TRIM3-201ENST00000345851 PPP1R18Q6NYC8 613 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 LRRC74BQ6ZQY2 392 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 OTOAQ7RTW8 1153 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 TRABD2AQ86V40 505 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 NIM1KQ8IY84 436 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 SLC5A5Q92911 643 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 HEMGNQ9BXL5 484 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 R3HDM2Q9Y2K5 976 aaKnown RBP22.68■■□□□ 1.22
TRIM3-201ENST00000345851 ZBTB39O15060 712 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 TBX10O75333 385 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 GAS8O95995 478 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 DLG4P78352 724 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 STAT4Q14765 748 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 TMEM179Q6ZVK1 233 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 HS2ST1Q7LGA3 356 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 GMLQ99445 158 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 G3BP2Q9UN86 482 aaKnown RBP22.68■■□□□ 1.22
TRIM3-201ENST00000345851 PCDHA1Q9Y5I3 950 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 CFAP69A5D8W1 941 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 MAGEB2O15479 319 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 EXOC3O60645 756 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 ITFG2Q969R8 447 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 GBP5Q96PP8 586 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 PIM2Q9P1W9 311 aa22.68■■□□□ 1.22
TRIM3-201ENST00000345851 TJP3O95049 919 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 ZCCHC18P0CG32 403 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 PTK6Q13882 451 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 CLNKQ7Z7G1 428 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 PHLDB2Q86SQ0 1253 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 ACTL7BQ9Y614 415 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 FSCN2O14926 492 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 PDK4Q16654 411 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 PLEKHG4Q58EX7 1191 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 HHATQ5VTY9 493 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 RINT1Q6NUQ1 792 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 NOP9Q86U38 636 aaKnown RBP22.67■■□□□ 1.22
TRIM3-201ENST00000345851 ETNPPLQ8TBG4 499 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 PSPC1Q8WXF1 523 aaKnown RBP22.67■■□□□ 1.22
TRIM3-201ENST00000345851 TRAPPC9Q96Q05 1148 aa22.67■■□□□ 1.22
TRIM3-201ENST00000345851 EURLQ9NYK6 297 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms