RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 AKAP5P24588 427 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 EPHB4P54760 987 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 PKN1Q16512 942 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 HEATR6Q6AI08 1181 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 OTOP2Q7RTS6 562 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 TMEM150BA6NC51 233 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 CTNNB1P35222 781 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 ZNF677Q86XU0 584 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 MGARPQ8TDB4 240 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 VPS39Q96JC1 886 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 GUCY2CP25092 1073 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 IQCB1Q15051 598 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 NBPF20Q3BBV1 942 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 SDE2Q6IQ49 451 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 ATP6V1E2Q96A05 226 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 PCDHB2Q9Y5E7 798 aa17.34■□□□□ 0.37
SMARCA4-201ENST00000344626 MAP2K2P36507 400 aa17.33■□□□□ 0.37
SMARCA4-201ENST00000344626 NRCAMQ92823 1304 aa17.33■□□□□ 0.37
SMARCA4-201ENST00000344626 ANO9A1A5B4 782 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 CARNS1A5YM72 827 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 BBS9Q3SYG4 887 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 TRIM42Q8IWZ5 723 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 ARHGAP24Q8N264 748 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 MID2Q9UJV3 735 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 PCDHB8Q9UN66 801 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 TEX33O43247 280 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 SRGAP2O75044 1071 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 AXLP30530 894 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 VSIG1Q86XK7 387 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 UHMK1Q8TAS1 419 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 HDAC11Q96DB2 347 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 DDX27Q96GQ7 796 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 HDAC6Q9UBN7 1215 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 GTF2H1P32780 548 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 TDRD10Q5VZ19 366 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 SLC5A5Q92911 643 aa17.33■□□□□ 0.36
SMARCA4-201ENST00000344626 PPP1R12AO14974 1030 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 CYTH3O43739 400 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 DRP2Q13474 957 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 ZNF410Q86VK4 478 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 PKNOX2Q96KN3 472 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 MRPL9Q9BYD2 267 aaKnown RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 SNTG2Q9NY99 539 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 CYP3A4P08684 503 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 FAM200BP0CF97 657 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 MYL4P12829 197 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 UCHL3P15374 230 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 ZNF235Q14590 738 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 TRIP13Q15645 432 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 GKAP1Q5VSY0 366 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 FAM171A1Q5VUB5 890 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 ZNF280DQ6N043 979 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 HINFPQ9BQA5 517 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 SMYD2Q9NRG4 433 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 UVRAGQ9P2Y5 699 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 KIAA0100Q14667 2235 aaKnown RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 MAPTP10636 758 aaKnown RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 PAPOLAP51003 745 aaKnown RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 TPD52P55327 224 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 TPI1P60174 286 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 C10orf120Q5SQS8 335 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 FIBCD1Q8N539 461 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 PYROXD1Q8WU10 500 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 RNF25Q96BH1 459 aaPredicted RBP17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 ASIC4Q96FT7 647 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 ABCF3Q9NUQ8 709 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 EFHC1Q5JVL4 640 aa17.32■□□□□ 0.36
SMARCA4-201ENST00000344626 ASGR1P07306 291 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 CDH6P55285 790 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 ARL4CP56559 192 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 DEPDC1BQ8WUY9 529 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 AP1M1Q9BXS5 423 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 UBE2OQ9C0C9 1292 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 RIPK3Q9Y572 518 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 TIMM13Q9Y5L4 95 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 SMIM10L2AP0DMW4 78 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 SMIM10L2BP0DMW5 78 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 AVPR1AP37288 418 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 C2orf54Q08AI8 447 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 STMN2Q93045 179 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 HEMGNQ9BXL5 484 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 CYB561D2O14569 222 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 ZNF131P52739 623 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 PTPAQ15257 358 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 CFAP36Q96G28 342 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 SRRDQ9UH36 339 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 FBXL21Q9UKT6 434 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 KIAA1257Q9ULG3 409 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 PDGFRAP16234 1089 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 SP100P23497 879 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 GIT2Q14161 759 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 KCNA10Q16322 511 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 KLC3Q6P597 504 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 TRAPPC11Q7Z392 1133 aa17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 GAS2L1Q99501 681 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-201ENST00000344626 APOL1O14791 398 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms