RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 RNF10Q8N5U6 811 aaKnown RBP23.63■■□□□ 1.37
CACNB1-201ENST00000344140 SLC43A3Q8NBI5 491 aa23.63■■□□□ 1.37
CACNB1-201ENST00000344140 UNC93B1Q9H1C4 597 aa23.63■■□□□ 1.37
CACNB1-201ENST00000344140 CNTN6Q9UQ52 1028 aa23.63■■□□□ 1.37
CACNB1-201ENST00000344140 DUSP10Q9Y6W6 482 aa23.63■■□□□ 1.37
CACNB1-201ENST00000344140 MACROD2A1Z1Q3 448 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 RECQL4O94761 1208 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 NOP9Q86U38 636 aaKnown RBP23.62■■□□□ 1.37
CACNB1-201ENST00000344140 SLC35F6Q8N357 371 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 SLC20A1Q8WUM9 679 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 DPP3Q9NY33 737 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 CNTN3Q9P232 1028 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 PCDHB2Q9Y5E7 798 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 CITO14578 2027 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 BTNL10A8MVZ5 291 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 ITGB3P05106 788 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 H2AFZP0C0S5 128 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 RBP5P82980 135 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 FAM26DQ5JW98 314 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 ALKAL1Q6UXT8 129 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 H2AFVQ71UI9 128 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 RPUSD2Q8IZ73 545 aaKnown RBP23.62■■□□□ 1.37
CACNB1-201ENST00000344140 CXorf38Q8TB03 319 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 VRTNQ9H8Y1 702 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 SEPT11Q9NVA2 429 aaKnown RBP23.62■■□□□ 1.37
CACNB1-201ENST00000344140 HES2Q9Y543 173 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 PCDHB4Q9Y5E5 795 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 UMODL1Q5DID0 1318 aa23.62■■□□□ 1.37
CACNB1-201ENST00000344140 FANCGO15287 622 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 CCL5P13501 91 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 YWHAEP62258 255 aaKnown RBP23.61■■□□□ 1.37
CACNB1-201ENST00000344140 CDR2Q01850 454 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 MTFR1Q15390 333 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 TRIM71Q2Q1W2 868 aaKnown RBP23.61■■□□□ 1.37
CACNB1-201ENST00000344140 ZNF667Q5HYK9 610 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 SCARA3Q6AZY7 606 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 ZNF677Q86XU0 584 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 RNF208Q9H0X6 261 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 PAK6Q9NQU5 681 aaPredicted RBP23.61■■□□□ 1.37
CACNB1-201ENST00000344140 IPPQ9Y573 584 aa23.61■■□□□ 1.37
CACNB1-201ENST00000344140 CTAGE9A4FU28 777 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 TACC1O75410 805 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 NFX1Q12986 1120 aaKnown RBP23.6■■□□□ 1.37
CACNB1-201ENST00000344140 FBXO47Q5MNV8 452 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 UBR7Q8N806 425 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 TRIM58Q8NG06 486 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 SQORQ9Y6N5 450 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 FRMPD3Q5JV73 1810 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 DNM1LO00429 736 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 STAU1O95793 577 aaKnown RBP23.6■■□□□ 1.37
CACNB1-201ENST00000344140 P4HA1P13674 534 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 TERF1P54274 439 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 ZBTB6Q15916 424 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 TMEM270Q6UE05 265 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 HACE1Q8IYU2 909 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 USP38Q8NB14 1042 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 BEST2Q8NFU1 509 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 ZNF333Q96JL9 665 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 NOX5Q96PH1 765 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 APOL6Q9BWW8 343 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 PACSIN1Q9BY11 444 aa23.6■■□□□ 1.37
CACNB1-201ENST00000344140 ARVCFO00192 962 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 GZMAP12544 262 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 CHRNB2P17787 502 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 POLR2BP30876 1174 aaKnown RBP23.59■■□□□ 1.37
CACNB1-201ENST00000344140 XKR4Q5GH76 650 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 SMG8Q8ND04 991 aaKnown RBP23.59■■□□□ 1.37
CACNB1-201ENST00000344140 DDX1Q92499 740 aaKnown RBP23.59■■□□□ 1.37
CACNB1-201ENST00000344140 ARMC5Q96C12 935 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 ALS2CR12Q96Q35 445 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 NAPGQ99747 312 aaPredicted RBP23.59■■□□□ 1.37
CACNB1-201ENST00000344140 MCOLN1Q9GZU1 580 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 PARP2Q9UGN5 583 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 AGAP1Q9UPQ3 857 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 RALGAPA2Q2PPJ7 1873 aa23.59■■□□□ 1.37
CACNB1-201ENST00000344140 XPOTO43592 962 aaKnown RBP23.58■■□□□ 1.37
CACNB1-201ENST00000344140 KCNE1P15382 129 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 ZSCAN20P17040 1043 aaPredicted RBP23.58■■□□□ 1.37
CACNB1-201ENST00000344140 AKAP5P24588 427 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 ASPAP45381 313 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 FMO1Q01740 532 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 PAK2Q13177 524 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 TAF3Q5VWG9 929 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 RBBP8NLQ8NC74 664 aaPredicted RBP23.58■■□□□ 1.37
CACNB1-201ENST00000344140 HPDLQ96IR7 371 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 ZMAT2Q96NC0 199 aaKnown RBP23.58■■□□□ 1.37
CACNB1-201ENST00000344140 ERVK-5Q9HDB9 667 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 ACP6Q9NPH0 428 aa23.58■■□□□ 1.37
CACNB1-201ENST00000344140 UBQLN1Q9UMX0 589 aaKnown RBP23.58■■□□□ 1.37
CACNB1-201ENST00000344140 ZNF132P52740 706 aa23.58■■□□□ 1.36
CACNB1-201ENST00000344140 WDR72Q3MJ13 1102 aa23.58■■□□□ 1.36
CACNB1-201ENST00000344140 BCO2Q9BYV7 579 aa23.58■■□□□ 1.36
CACNB1-201ENST00000344140 TRPV6Q9H1D0 765 aa23.58■■□□□ 1.36
CACNB1-201ENST00000344140 AGO3Q9H9G7 860 aaKnown RBP23.58■■□□□ 1.36
CACNB1-201ENST00000344140 L2HGDHQ9H9P8 463 aa23.58■■□□□ 1.36
CACNB1-201ENST00000344140 CISHQ9NSE2 258 aa23.58■■□□□ 1.36
CACNB1-201ENST00000344140 NXF1Q9UBU9 619 aaKnown RBP23.58■■□□□ 1.36
CACNB1-201ENST00000344140 A0A0A6YYK5 440 aaPredicted RBP23.57■■□□□ 1.36
CACNB1-201ENST00000344140 URI1O94763 535 aaPredicted RBP23.57■■□□□ 1.36
CACNB1-201ENST00000344140 MMEP08473 750 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms