RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 RNF169Q8NCN4 708 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 FUBP3Q96I24 572 aaKnown RBP eCLIP3.91□□□□□ -1.78
LRRC39-201ENST00000342895 SLC2A13Q96QE2 648 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 PAGR1Q9BTK6 254 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 AKIP1Q9NQ31 210 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 TUBD1Q9UJT1 453 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 DNM3Q9UQ16 869 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 PCDHGA9Q9Y5G4 932 aaKnown RBP3.91□□□□□ -1.78
LRRC39-201ENST00000342895 PCDHGA8Q9Y5G5 932 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 PCDHGA7Q9Y5G6 932 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 PCDHGA6Q9Y5G7 932 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 PCDHGA3Q9Y5H0 932 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 MRFAP1Q9Y605 127 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 SCINQ9Y6U3 715 aa3.91□□□□□ -1.78
LRRC39-201ENST00000342895 ABHD16AO95870 558 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 MT-CO1P00395 513 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 AMY1AP04745 511 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 HLA-DOAP06340 250 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 RAP2AP10114 183 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 MYBL2P10244 700 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 C5AR1P21730 350 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 PCSK1P29120 753 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 PTTG1IPP53801 180 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 FAM189BP81408 668 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 PDCD4Q53EL6 469 aaKnown RBP3.9□□□□□ -1.78
LRRC39-201ENST00000342895 DACT2Q5SW24 774 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 KCNV1Q6PIU1 500 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 MIGA2Q7L4E1 593 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 PROKR1Q8TCW9 393 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 PAIP2Q9BPZ3 127 aaKnown RBP3.9□□□□□ -1.78
LRRC39-201ENST00000342895 SEZ6LQ9BYH1 1024 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 CWC25Q9NXE8 425 aaPredicted RBP3.9□□□□□ -1.78
LRRC39-201ENST00000342895 SLC23A1Q9UHI7 598 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 ATP11BQ9Y2G3 1177 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 COL4A3Q01955 1670 aa3.9□□□□□ -1.78
LRRC39-201ENST00000342895 ZNF185O15231 689 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 FOXN1O15353 648 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 KATNA1O75449 491 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 FAM163BP0C2L3 166 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 ALAS1P13196 640 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 KRT4P19013 534 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 GCSHP23434 173 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 ALDH1A3P47895 512 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 CHN2P52757 468 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 CTXN1P60606 82 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 CDC42EP1Q00587 391 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 DMTNQ08495 405 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 ATP2B3Q16720 1220 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 ABCB5Q2M3G0 1257 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 PLEKHG6Q3KR16 790 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 PCSK4Q6UW60 755 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 MRGPRGQ86SM5 289 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 CCAR1Q8IX12 1150 aaKnown RBP3.9□□□□□ -1.79
LRRC39-201ENST00000342895 RPUSD2Q8IZ73 545 aaKnown RBP3.9□□□□□ -1.79
LRRC39-201ENST00000342895 HDAC10Q969S8 669 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 FUBP1Q96AE4 644 aaKnown RBP3.9□□□□□ -1.79
LRRC39-201ENST00000342895 MTMR8Q96EF0 704 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 CHFRQ96EP1 664 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 TEKT5Q96M29 485 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 NEU1Q99519 415 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 CCDC94Q9BW85 323 aaPredicted RBP3.9□□□□□ -1.79
LRRC39-201ENST00000342895 REXO4Q9GZR2 422 aaKnown RBP3.9□□□□□ -1.79
LRRC39-201ENST00000342895 SLITRK6Q9H5Y7 841 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 INTUQ9ULD6 942 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 IPPQ9Y573 584 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 ACTL7AQ9Y615 435 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 FPGT-TNNI3KV9GXZ4 949 aa3.9□□□□□ -1.79
LRRC39-201ENST00000342895 CENPVL1A0A0U1RR11 272 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 NCR1O76036 304 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 CFIP05156 583 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 DDCP20711 480 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 FPR1P21462 350 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 ADKP55263 362 aaKnown RBP3.89□□□□□ -1.79
LRRC39-201ENST00000342895 BLOC1S1P78537 153 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 MXRA7P84157 204 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 UBXN2BQ14CS0 331 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 EFCAB2Q5VUJ9 269 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 PPP4R3AQ6IN85 833 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 ZGPATQ8N5A5 531 aaKnown RBP3.89□□□□□ -1.79
LRRC39-201ENST00000342895 PDILTQ8N807 584 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 FBXO18Q8NFZ0 1043 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 STON2Q8WXE9 905 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 MLST8Q9BVC4 326 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 ASPSCR1Q9BZE9 553 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 LRRC27Q9C0I9 530 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 CCDC8Q9H0W5 538 aaPredicted RBP3.89□□□□□ -1.79
LRRC39-201ENST00000342895 CXorf56Q9H5V9 222 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 LDAHQ9H6V9 325 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 KLHL11Q9NVR0 708 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 USP15Q9Y4E8 981 aaPredicted RBP3.89□□□□□ -1.79
LRRC39-201ENST00000342895 CEP83Q9Y592 693 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 TNKSO95271 1327 aa3.89□□□□□ -1.79
LRRC39-201ENST00000342895 MYBBP1AQ9BQG0 1328 aaKnown RBP3.89□□□□□ -1.79
LRRC39-201ENST00000342895 A0A087X1B8 175 aa3.88□□□□□ -1.79
LRRC39-201ENST00000342895 HTRA2O43464 458 aaPredicted RBP3.88□□□□□ -1.79
LRRC39-201ENST00000342895 XPOTO43592 962 aaKnown RBP3.88□□□□□ -1.79
LRRC39-201ENST00000342895 EIF5P55010 431 aaKnown RBP3.88□□□□□ -1.79
LRRC39-201ENST00000342895 RAP2BP61225 183 aa3.88□□□□□ -1.79
LRRC39-201ENST00000342895 ACAP2Q15057 778 aa3.88□□□□□ -1.79
LRRC39-201ENST00000342895 PCBP2Q15366 365 aaKnown RBP eCLIP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms