RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 KLF6Q99612 283 aaPredicted RBP14.28□□□□□ -0.12
TMEM248-201ENST00000341567 MTMR12Q9C0I1 747 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 AGO4Q9HCK5 861 aaKnown RBP14.28□□□□□ -0.12
TMEM248-201ENST00000341567 RGPD1P0DJD0 1748 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 CREB3O43889 395 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 VTNP04004 478 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 GTF2H1P32780 548 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 CACNB2Q08289 660 aaPredicted RBP14.28□□□□□ -0.12
TMEM248-201ENST00000341567 DRP2Q13474 957 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 PDE1CQ14123 709 aaPredicted RBP14.28□□□□□ -0.12
TMEM248-201ENST00000341567 LRIG3Q6UXM1 1119 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 TPCN2Q8NHX9 752 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 ATP2A3Q93084 1043 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 SHISA4Q96DD7 197 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 MTFR1LQ9H019 292 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 CFAP73A6NFT4 308 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 HSPA9P38646 679 aaKnown RBP14.28□□□□□ -0.12
TMEM248-201ENST00000341567 SEMA3FQ13275 785 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 TMEM119Q4V9L6 283 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 ZBED8Q8IZ13 594 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 SMYD3Q9H7B4 428 aa14.28□□□□□ -0.12
TMEM248-201ENST00000341567 A1CFQ9NQ94 594 aaKnown RBP14.28□□□□□ -0.12
TMEM248-201ENST00000341567 DDX20Q9UHI6 824 aaKnown RBP14.28□□□□□ -0.12
TMEM248-201ENST00000341567 CCDC78A2IDD5 438 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 TULP2O00295 520 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 TRPA1O75762 1119 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 SLC12A3P55017 1021 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 LMNB2Q03252 620 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 NME3Q13232 169 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 Q4G0T1 1027 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 ANKMY2Q8IV38 441 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 TEX2Q8IWB9 1127 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 SCN4BQ8IWT1 228 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 OR6J1Q8NGC5 347 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 C18orf8Q96DM3 657 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 MED15Q96RN5 788 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 IFT122Q9HBG6 1241 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 TMBIM4Q9HC24 238 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 ARL2BPQ9Y2Y0 163 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 SCINQ9Y6U3 715 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 MAP3K7O43318 606 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 OATP04181 439 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 LCP1P13796 627 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 KIF22Q14807 665 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 TAF1CQ15572 869 aaPredicted RBP14.27□□□□□ -0.12
TMEM248-201ENST00000341567 KIZQ2M2Z5 673 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 GRAMD1BQ3KR37 738 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 KCNT1Q5JUK3 1230 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 FAM83AQ86UY5 434 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 SMC1BQ8NDV3 1235 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 PPP4R1Q8TF05 950 aa14.27□□□□□ -0.12
TMEM248-201ENST00000341567 MARF1Q9Y4F3 1742 aaKnown RBP14.27□□□□□ -0.12
TMEM248-201ENST00000341567 GJB6O95452 261 aa14.27□□□□□ -0.13
TMEM248-201ENST00000341567 EPHB1P54762 984 aa14.27□□□□□ -0.13
TMEM248-201ENST00000341567 CDH6P55285 790 aa14.27□□□□□ -0.13
TMEM248-201ENST00000341567 DHX34Q14147 1143 aaKnown RBP14.27□□□□□ -0.13
TMEM248-201ENST00000341567 RWDD4Q6NW29 188 aaKnown RBP14.27□□□□□ -0.13
TMEM248-201ENST00000341567 CENPUQ71F23 418 aa14.27□□□□□ -0.13
TMEM248-201ENST00000341567 ANKRD13AQ8IZ07 590 aa14.27□□□□□ -0.13
TMEM248-201ENST00000341567 PDIK1LQ8N165 341 aa14.27□□□□□ -0.13
TMEM248-201ENST00000341567 ROBO1Q9Y6N7 1651 aa14.27□□□□□ -0.13
TMEM248-201ENST00000341567 TNPO2O14787 897 aaKnown RBP14.26□□□□□ -0.13
TMEM248-201ENST00000341567 RGL2O15211 777 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 EIF3DO15371 548 aaKnown RBP eCLIP14.26□□□□□ -0.13
TMEM248-201ENST00000341567 DCTN3O75935 186 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 AGTP01019 485 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 KRT3P12035 628 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 ARL4AP40617 200 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 HUNKP57058 714 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 CDR2Q01850 454 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 DNAJC3Q13217 504 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 FASTKD5Q7L8L6 764 aaKnown RBP14.26□□□□□ -0.13
TMEM248-201ENST00000341567 PIP4K2CQ8TBX8 421 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 RUBCNQ92622 972 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 TRIM55Q9BYV6 548 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 SIK2Q9H0K1 926 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 DHX35Q9H5Z1 703 aaKnown RBP14.26□□□□□ -0.13
TMEM248-201ENST00000341567 PRLRP16471 622 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 RPS12P25398 132 aaKnown RBP14.26□□□□□ -0.13
TMEM248-201ENST00000341567 AMPD2Q01433 879 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 MAP7Q14244 749 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 LRRC36Q1X8D7 754 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 MDH1BQ5I0G3 518 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 AGBL2Q5U5Z8 902 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 GPAT2Q6NUI2 795 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 ATRNO75882 1429 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 PFDN1O60925 122 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 TJP3O95049 919 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 TMPRSS15P98073 1019 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
TMEM248-201ENST00000341567 C1orf131Q8NDD1 294 aaKnown RBP14.26□□□□□ -0.13
TMEM248-201ENST00000341567 TRPM4Q8TD43 1214 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 CCDC124Q96CT7 223 aaKnown RBP14.26□□□□□ -0.13
TMEM248-201ENST00000341567 FAM161BQ96MY7 647 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 SEMA4AQ9H3S1 761 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 RIPK3Q9Y572 518 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 IGSF9BQ9UPX0 1349 aa14.26□□□□□ -0.13
TMEM248-201ENST00000341567 CCDC195A0A1B0GUA6 201 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms