RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZDBF2Q9HCK1 2354 aa16.74■□□□□ 0.27
VAPA-201ENST00000340541 MYO10Q9HD67 2058 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 EIF3DO15371 548 aaKnown RBP eCLIP16.73■□□□□ 0.271e-10■□□□□ 9.8
VAPA-201ENST00000340541 C1RP00736 705 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 FGFR3P22607 806 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 SYKP43405 635 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 BRCC3P46736 316 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 POU5F1Q01860 360 aaKnown RBP16.73■□□□□ 0.27
VAPA-201ENST00000340541 TCF15Q12870 199 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 ELAVL2Q12926 359 aaKnown RBP16.73■□□□□ 0.27
VAPA-201ENST00000340541 POSTNQ15063 836 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 PRSS55Q6UWB4 352 aaPredicted RBP16.73■□□□□ 0.27
VAPA-201ENST00000340541 CYP26C1Q6V0L0 522 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 C15orf39Q6ZRI6 1047 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 GPR149Q86SP6 731 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 TDRD5Q8NAT2 981 aaKnown RBP16.73■□□□□ 0.27
VAPA-201ENST00000340541 LNX1Q8TBB1 728 aaPredicted RBP16.73■□□□□ 0.27
VAPA-201ENST00000340541 RIN2Q8WYP3 895 aaPredicted RBP16.73■□□□□ 0.27
VAPA-201ENST00000340541 PIK3R5Q8WYR1 880 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 KIF12Q96FN5 646 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 TSPAN18Q96SJ8 248 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 CBWD1Q9BRT8 395 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 TTPALQ9BTX7 342 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 SFXN1Q9H9B4 322 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 FNIP2Q9P278 1114 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 DPP7Q9UHL4 492 aa16.73■□□□□ 0.27
VAPA-201ENST00000340541 I3L4J1 428 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 NFICP08651 508 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 RPL17P18621 184 aaKnown RBP16.72■□□□□ 0.27
VAPA-201ENST00000340541 CYP3A5P20815 502 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 GARTP22102 1010 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 KLRC2P26717 231 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 LRPAP1P30533 357 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 GUCY2FP51841 1108 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 WNT7BP56706 349 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 JADE1Q6IE81 842 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 ELMSAN1Q6PJG2 1045 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.72■□□□□ 0.27
VAPA-201ENST00000340541 STXBP4Q6ZWJ1 553 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 CD302Q8IX05 232 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 SYCP3Q8IZU3 236 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 C12orf76Q8N812 135 aaPredicted RBP16.72■□□□□ 0.27
VAPA-201ENST00000340541 FEZF2Q8TBJ5 459 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 ACSF2Q96CM8 615 aaPredicted RBP16.72■□□□□ 0.27
VAPA-201ENST00000340541 SAAL1Q96ER3 474 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 RHOBTB2Q9BYZ6 727 aa16.72■□□□□ 0.27
VAPA-201ENST00000340541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.274e-10■□□□□ 11.3
VAPA-201ENST00000340541 CIZ1Q9ULV3 898 aaPredicted RBP16.72■□□□□ 0.27
VAPA-201ENST00000340541 UBQLN1Q9UMX0 589 aaKnown RBP16.72■□□□□ 0.27
VAPA-201ENST00000340541 KMT2EQ8IZD2 1858 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 MTCL1Q9Y4B5 1905 aaKnown RBP16.71■□□□□ 0.27
VAPA-201ENST00000340541 TGFB1I1O43294 461 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 ADH1AP07327 375 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 SP100P23497 879 aaPredicted RBP16.71■□□□□ 0.27
VAPA-201ENST00000340541 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
VAPA-201ENST00000340541 BMT2Q1RMZ1 405 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 SPATA1Q5VX52 437 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 KANK3Q6NY19 840 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 KRBA2Q6ZNG9 492 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 OTOP3Q7RTS5 596 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 CMASQ8NFW8 434 aaPredicted RBP16.71■□□□□ 0.27
VAPA-201ENST00000340541 CLSTN3Q9BQT9 956 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 ASB7Q9H672 318 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 SLC39A2Q9NP94 309 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 LIMD1Q9UGP4 676 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 CDH22Q9UJ99 828 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 DERAQ9Y315 318 aa16.71■□□□□ 0.27
VAPA-201ENST00000340541 UBE4BO95155 1302 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 ADAM12O43184 909 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 ZNF202O95125 648 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 MYL1P05976 194 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 VCPP55072 806 aaKnown RBP16.7■□□□□ 0.26
VAPA-201ENST00000340541 STK4Q13043 487 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 PSMD5Q16401 504 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 KMT5BQ4FZB7 885 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 LILRA6Q6PI73 481 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 RSPO2Q6UXX9 243 aaPredicted RBP16.7■□□□□ 0.26
VAPA-201ENST00000340541 CEP57Q86XR8 500 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 BRSK2Q8IWQ3 736 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 EFCAB13Q8IY85 973 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 KIAA0895Q8NCT3 520 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 HDAC7Q8WUI4 952 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 FAM213AQ9BRX8 229 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 C2CD2Q9Y426 696 aa16.7■□□□□ 0.26
VAPA-201ENST00000340541 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.7■□□□□ 0.26
VAPA-201ENST00000340541 GOLGA8IPA6NC78 632 aa16.69■□□□□ 0.26
VAPA-201ENST00000340541 GOLGA8JA6NMD2 632 aa16.69■□□□□ 0.26
VAPA-201ENST00000340541 PPEF2O14830 753 aa16.69■□□□□ 0.26
VAPA-201ENST00000340541 GALR2O43603 387 aaPredicted RBP16.69■□□□□ 0.26
VAPA-201ENST00000340541 TRAPPC3O43617 180 aa16.69■□□□□ 0.26
VAPA-201ENST00000340541 EXTL3O43909 919 aa16.69■□□□□ 0.26
VAPA-201ENST00000340541 WEE2P0C1S8 567 aa16.69■□□□□ 0.26
VAPA-201ENST00000340541 AARSP49588 968 aaKnown RBP eCLIP16.69■□□□□ 0.261e-7■■□□□ 14.2
VAPA-201ENST00000340541 CREMQ03060 361 aa16.69■□□□□ 0.26
VAPA-201ENST00000340541 DPYDQ12882 1025 aa16.69■□□□□ 0.26
VAPA-201ENST00000340541 TMEM132DQ14C87 1099 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms