RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 CATSPERGQ6ZRH7 1159 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 MMS22LQ6ZRQ5 1243 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 TAOK1Q7L7X3 1001 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ATL2Q8NHH9 583 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ASAP3Q8TDY4 903 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ATXN2LQ8WWM7 1075 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ATG4AQ8WYN0 398 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 VCPIP1Q96JH7 1222 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 DCLK3Q9C098 648 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 MAF1Q9H063 256 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 CDC42EP4Q9H3Q1 356 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 DHX33Q9H6R0 707 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 HOMER3Q9NSC5 361 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 PCDHB4Q9Y5E5 795 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 PTPRJQ12913 1337 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 GOLGA6L7A0A1B0GV03 622 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 LRRIQ4A6NIV6 560 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 NFKBIEO00221 500 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 PSTPIP1O43586 416 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ATP4AP20648 1035 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 GLRA2P23416 452 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 GNA15P30679 374 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 CAV1Q03135 178 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 MKRN4PQ13434 485 aaPredicted RBP16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 PLCB4Q15147 1175 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 STXBP2Q15833 593 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 RHBDF2Q6PJF5 856 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 TMEM270Q6UE05 265 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 CCDC50Q8IVM0 306 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 RHOT1Q8IXI2 618 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ABRAQ8N0Z2 381 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 SLC7A3Q8WY07 619 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ZNF317Q96PQ6 595 aaPredicted RBP16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 C11orf70Q9BRQ4 267 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 MSTO1Q9BUK6 570 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 HAPLN2Q9GZV7 340 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 APOBEC3GQ9HC16 384 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 AAASQ9NRG9 546 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 INTS9Q9NV88 658 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ADAM22Q9P0K1 906 aa16.04■□□□□ 0.16
TNFSF13-201ENST00000338784 ATG7O95352 703 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 TBXAS1P24557 533 aaPredicted RBP16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 IVDP26440 423 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 ARL2P36404 184 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 NOMO3P69849 1222 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 PPP1R2P3Q6NXS1 205 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 ZBTB45Q96K62 511 aaPredicted RBP16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 CCDC114Q96M63 670 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 HERPUD2Q9BSE4 406 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 DDX23Q9BUQ8 820 aaKnown RBP16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 ACTR5Q9H9F9 607 aaPredicted RBP16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 HOXC10Q9NYD6 342 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 GJA3Q9Y6H8 435 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 SCINQ9Y6U3 715 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 UMODL1Q5DID0 1318 aa16.03■□□□□ 0.16
TNFSF13-201ENST00000338784 ACSL3O95573 720 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 CFHP08603 1231 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 CLTAP09496 248 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 RALAP11233 206 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 ATF2P15336 505 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 KLF1Q13351 362 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 MAMLD1Q13495 774 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 PHF13Q86YI8 300 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 PASD1Q8IV76 773 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 CCDC13Q8IYE1 715 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 ZNF526Q8TF50 670 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 SCLT1Q96NL6 688 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 CGRRF1Q99675 332 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 TRAIPQ9BWF2 469 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 HEMGNQ9BXL5 484 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 OSBPL7Q9BZF2 842 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 GPBP1L1Q9HC44 474 aaPredicted RBP16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 ANKFY1Q9P2R3 1169 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 ZNF541Q9H0D2 1346 aa16.02■□□□□ 0.16
TNFSF13-201ENST00000338784 A0A0B4J269 797 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 ICAM3P32942 547 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 CHKAP35790 457 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 ADCY8P40145 1251 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 ITGA8P53708 1063 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 TRIP13Q15645 432 aaPredicted RBP16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 LONRF1Q17RB8 773 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 ZBTB41Q5SVQ8 909 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 PRAMEF18Q5VWM3 479 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 DAB2IPQ5VWQ8 1189 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 PLEKHA7Q6IQ23 1121 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 RBBP8NLQ8NC74 664 aaPredicted RBP16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 BBXQ8WY36 941 aaPredicted RBP16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 P3H4Q92791 437 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 SERPINB12Q96P63 405 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 TARS2Q9BW92 718 aaKnown RBP16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 CCDC113Q9H0I3 377 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 CCDC134Q9H6E4 229 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 FBXO40Q9UH90 709 aa16.02■□□□□ 0.15
TNFSF13-201ENST00000338784 CNTN6Q9UQ52 1028 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms