RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 BNIPLQ7Z465 357 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 NUP160Q12769 1436 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 ABCE1P61221 599 aaKnown RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 PPP2R2AP63151 447 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 TAF1CQ15572 869 aaPredicted RBP12.35□□□□□ -0.43
SHANK2-201ENST00000338508 C10orf120Q5SQS8 335 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 CCDC33Q8N5R6 958 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 TMEM47Q9BQJ4 181 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 NDEL1Q9GZM8 345 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 KRT84Q9NSB2 600 aa12.35□□□□□ -0.43
SHANK2-201ENST00000338508 ATP10AO60312 1499 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 PRKCBP05771 671 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 CHI3L1P36222 383 aaPredicted RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 MAPRE2Q15555 327 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 UBA3Q8TBC4 463 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 ZNF560Q96MR9 790 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 MCEEQ96PE7 176 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 OSBPL9Q96SU4 736 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 ACAD9Q9H845 621 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 ENTPD7Q9NQZ7 604 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 FEN1P39748 380 aaKnown RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 CLK1P49759 484 aaKnown RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 HPS3Q969F9 1004 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 ABI2Q9NYB9 513 aaPredicted RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 ARAP3Q8WWN8 1544 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 CAND2O75155 1236 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 ATP5HO75947 161 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 ALOX15P16050 662 aaPredicted RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 KRT76Q01546 638 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 C16orf72Q14CZ0 275 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 DCAF6Q58WW2 860 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 LRRC71Q8N4P6 559 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 MTIF3Q9H2K0 278 aaKnown RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 GMNCA6NCL1 334 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 PARNO95453 639 aaKnown RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 LRG1P02750 347 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 GSTM1P09488 218 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 PTPN7P35236 360 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 MCAMP43121 646 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 RUNX1T1Q06455 604 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 PLCL1Q15111 1095 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 SH3BP5LQ7L8J4 393 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 EPC1Q9H2F5 836 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 NMRK2Q9NPI5 230 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 DBR1Q9UK59 544 aaKnown RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 F8W810 466 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 CCDC188H7C350 402 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 EEF2KO00418 725 aaKnown RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 KLHL18O94889 574 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
SHANK2-201ENST00000338508 HPGDP15428 266 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 OLFML2BQ68BL8 750 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 STAG2Q8N3U4 1231 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 WNK4Q96J92 1243 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 FAM96AQ9H5X1 160 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 SSH2Q76I76 1423 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 WDR62O43379 1518 aa12.34□□□□□ -0.43
SHANK2-201ENST00000338508 XPO1O14980 1071 aaKnown RBP12.33□□□□□ -0.43
SHANK2-201ENST00000338508 MAPKBP1O60336 1514 aa12.33□□□□□ -0.43
SHANK2-201ENST00000338508 ATP12AP54707 1039 aa12.33□□□□□ -0.43
SHANK2-201ENST00000338508 CAV1Q03135 178 aa12.33□□□□□ -0.43
SHANK2-201ENST00000338508 AP3B2Q13367 1082 aa12.33□□□□□ -0.43
SHANK2-201ENST00000338508 TRIM71Q2Q1W2 868 aaKnown RBP12.33□□□□□ -0.43
SHANK2-201ENST00000338508 USP39Q53GS9 565 aaKnown RBP12.33□□□□□ -0.43
SHANK2-201ENST00000338508 RCSD1Q6JBY9 416 aa12.33□□□□□ -0.43
SHANK2-201ENST00000338508 SLC39A10Q9ULF5 831 aa12.33□□□□□ -0.43
SHANK2-201ENST00000338508 SCP2P22307 547 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 GRK2P25098 689 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 FLT3P36888 993 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 NME5P56597 212 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 P3H1Q32P28 736 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 CYB5R4Q7L1T6 521 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 NFKBIZQ9BYH8 718 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 MYOM2P54296 1465 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 FAM107AO95990 144 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 MYL2P10916 166 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 OTOAQ7RTW8 1153 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 GAS2L3Q86XJ1 694 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 EME1Q96AY2 570 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 TADA1Q96BN2 335 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 JPH1Q9HDC5 661 aaPredicted RBP12.33□□□□□ -0.44
SHANK2-201ENST00000338508 ZNF500O60304 480 aaPredicted RBP12.33□□□□□ -0.44
SHANK2-201ENST00000338508 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 RALGDSQ12967 914 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 FHDC1Q9C0D6 1143 aaPredicted RBP12.33□□□□□ -0.44
SHANK2-201ENST00000338508 WNT8AQ9H1J5 351 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
SHANK2-201ENST00000338508 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 CAPN15O75808 1086 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 HARS2P49590 506 aaKnown RBP12.33□□□□□ -0.44
SHANK2-201ENST00000338508 TCEA2Q15560 299 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 DPF3Q92784 378 aa12.33□□□□□ -0.44
SHANK2-201ENST00000338508 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms