RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 C18orf25Q96B23 403 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-202ENST00000337571 PLEKHA5Q9HAU0 1116 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 CYP4F11Q9HBI6 524 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 HCFC1R1Q9NWW0 138 aa11.63□□□□□ -0.55
CAPN3-202ENST00000337571 DNMT3BQ9UBC3 853 aaKnown RBP11.63□□□□□ -0.55
CAPN3-202ENST00000337571 CFAP54Q96N23 3096 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 MYO15AQ9UKN7 3530 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ZNF197O14709 1029 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 XPOTO43592 962 aaKnown RBP11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ABLIM3O94929 683 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 FAM13AO94988 1023 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ATF2P15336 505 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ABCD1P33897 745 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 LIG4P49917 911 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ROR1Q01973 937 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 SNW1Q13573 536 aaKnown RBP11.62□□□□□ -0.55
CAPN3-202ENST00000337571 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 CYP4A22Q5TCH4 519 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 TPGS2Q68CL5 300 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 IQCEQ6IPM2 695 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 SLC8B1Q6J4K2 584 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ZNF280DQ6N043 979 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 KCNG4Q8TDN1 519 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 MCRS1Q96EZ8 462 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ZNF512Q96ME7 567 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-202ENST00000337571 TBC1D32Q96NH3 1257 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 RPP25Q9BUL9 199 aaKnown RBP11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ZHX3Q9H4I2 956 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 GDE1Q9NZC3 331 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 ODF2LQ9ULJ1 636 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 MAFFQ9ULX9 164 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 DOCK8Q8NF50 2099 aa11.62□□□□□ -0.55
CAPN3-202ENST00000337571 MYH15Q9Y2K3 1946 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 DOCK6Q96HP0 2047 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 ARHGEF37A1IGU5 675 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 ABLIM1O14639 778 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 HNRNPDLO14979 420 aaKnown RBP11.61□□□□□ -0.55
CAPN3-202ENST00000337571 DCNP07585 359 aaKnown RBP11.61□□□□□ -0.55
CAPN3-202ENST00000337571 RHOP08100 348 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 CPB1P15086 417 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 LONP1P36776 959 aaKnown RBP11.61□□□□□ -0.55
CAPN3-202ENST00000337571 NCKAP1LP55160 1127 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 STARD6P59095 220 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 PRKCQQ04759 706 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 PPP2R3AQ06190 1150 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 MCL1Q07820 350 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 TMEM119Q4V9L6 283 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 SLC44A4Q53GD3 710 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 ARSHQ5FYA8 562 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 DSTYKQ6XUX3 929 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 PDZD4Q76G19 769 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-202ENST00000337571 ASCL5Q7RTU5 278 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 BRAPQ7Z569 592 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 USP37Q86T82 979 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 GPBP1Q86WP2 473 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 NPAS3Q8IXF0 933 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 TCEAL8Q8IYN2 117 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 ING5Q8WYH8 240 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 DDX12PQ92771 950 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 SUSD3Q96L08 255 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 TSPAN18Q96SJ8 248 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 CORO1BQ9BR76 489 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 OXCT2Q9BYC2 517 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-202ENST00000337571 RPF1Q9H9Y2 349 aaKnown RBP11.61□□□□□ -0.55
CAPN3-202ENST00000337571 PARVGQ9HBI0 331 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 FBXL5Q9UKA1 691 aa11.61□□□□□ -0.55
CAPN3-202ENST00000337571 ZFHX2Q9C0A1 2572 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-202ENST00000337571 WDR27A2RRH5 827 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 PRR23AA6NEV1 266 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 TRAK2O60296 914 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 TBCAO75347 108 aaKnown RBP11.6□□□□□ -0.55
CAPN3-202ENST00000337571 ECI2O75521 394 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 CXCL8P10145 99 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 PDCP20941 246 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 YWHAHQ04917 246 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-202ENST00000337571 SPAG1Q07617 926 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 ADCY1Q08828 1119 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 MRPL58Q14197 206 aaKnown RBP11.6□□□□□ -0.55
CAPN3-202ENST00000337571 PJA1Q8NG27 643 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 NELL2Q99435 816 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 REEP2Q9BRK0 252 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 MSTO1Q9BUK6 570 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 BCO2Q9BYV7 579 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 SEMA4AQ9H3S1 761 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 AVENQ9NQS1 362 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-202ENST00000337571 TUBGCP4Q9UGJ1 667 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 TBX20Q9UMR3 447 aa11.6□□□□□ -0.55
CAPN3-202ENST00000337571 UBQLN1Q9UMX0 589 aaKnown RBP11.6□□□□□ -0.55
CAPN3-202ENST00000337571 WDR87Q6ZQQ6 2873 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 KANSL1LA0AUZ9 987 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 TTC26A0AVF1 554 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 VPS37CA5D8V6 355 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-202ENST00000337571 LACTBL1A8MY62 500 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 K7ENM7 598 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 OGTO15294 1046 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 NCAM2O15394 837 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 TBC1D4O60343 1298 aa11.59□□□□□ -0.55
CAPN3-202ENST00000337571 PPP1R37O75864 691 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms