RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 INPP5AQ14642 412 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 NUDCD3Q8IVD9 361 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 DUX4Q9UBX2 424 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 EXTL3O43909 919 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 FAM200BP0CF97 657 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 BFSP2Q13515 415 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 CCDC137Q6PK04 289 aaKnown RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 MAD2L2Q9UI95 211 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 INTUQ9ULD6 942 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 SKA1Q96BD8 255 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 RSAD1Q9HA92 442 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 HMGCS2P54868 508 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 KCNA1Q09470 495 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 NBPF20Q3BBV1 942 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 POTEAQ6S8J7 498 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 NR1H4Q96RI1 486 aaPredicted RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 NAT9Q9BTE0 207 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 EVPLQ92817 2033 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 TGFB2P61812 414 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 C16orf72Q14CZ0 275 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 SLFNL1Q499Z3 407 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 PKN3Q6P5Z2 889 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 CYFIP1Q7L576 1253 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 SLC7A14Q8TBB6 771 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 TRPC7Q9HCX4 862 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 SPTLC3Q9NUV7 552 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 NINQ8N4C6 2090 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 MAN1A2O60476 641 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 GCKP35557 465 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 SLC20A1Q8WUM9 679 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 NSUN4Q96CB9 384 aaKnown RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 PPARGC1AQ9UBK2 798 aaKnown RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 UBA6A0AVT1 1052 aaPredicted RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 NLRP11P59045 1033 aaKnown RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 NUGGCQ68CJ6 796 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 TAS2R42Q7RTR8 314 aa12.88□□□□□ -0.35
FN1-202ENST00000336916 SARS2Q9NP81 518 aaKnown RBP12.88□□□□□ -0.35
FN1-202ENST00000336916 ANGPT2O15123 496 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 TGFB3P10600 412 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 NFIAQ12857 509 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 RABL6Q3YEC7 729 aaPredicted RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 ITIH5Q86UX2 942 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 TAGAPQ8N103 731 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 KANSL3Q9P2N6 904 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 ITIH6Q6UXX5 1313 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 DIAPH2O60879 1101 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 EIF3EP60228 445 aaKnown RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 MRFAP1Q9Y605 127 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 POU5F1BQ06416 359 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 CASP8Q14790 479 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 FASTKD1Q53R41 847 aaKnown RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 PPP1R16BQ96T49 567 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 PRPF18Q99633 342 aaKnown RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 PCDHB2Q9Y5E7 798 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 TMEM131LA2VDJ0 1609 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 SLC11A2P49281 568 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 NFIXQ14938 502 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 TIGD7Q6NT04 549 aaPredicted RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 RUBCNLQ9H714 662 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 CHD2O14647 1828 aaKnown RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 ZNF484Q5JVG2 852 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 RABGAP1LQ5R372 815 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 PGBD3Q8N328 593 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 EXT2Q93063 718 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 TSEN34Q9BSV6 310 aaKnown RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 ZFP69BQ9UJL9 534 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 FNTAP49354 379 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 TP53BP2Q13625 1128 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 TBC1D16Q8TBP0 767 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 RIN2Q8WYP3 895 aaPredicted RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 FAM84BQ96KN1 310 aaPredicted RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 PLEKHA4Q9H4M7 779 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 RGL1Q9NZL6 768 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 PAK5Q9P286 719 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 AKT1P31749 480 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 RAP1GDS1P52306 607 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
FN1-202ENST00000336916 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
FN1-202ENST00000336916 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 SSU72P8A0A1W2PR75 194 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 CLASP2O75122 1294 aaKnown RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 ANXA9O76027 345 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
FN1-202ENST00000336916 CCL15Q16663 113 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 C1QTNF7Q9BXJ2 289 aa12.86□□□□□ -0.35
FN1-202ENST00000336916 TPX2Q9ULW0 747 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms