RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 PSMC6P62333 389 aa11.71□□□□□ -0.53
SEC23B-202ENST00000336714 AP2B1P63010 937 aa11.71□□□□□ -0.53
SEC23B-202ENST00000336714 PDK4Q16654 411 aa11.71□□□□□ -0.53
SEC23B-202ENST00000336714 TRABD2AQ86V40 505 aa11.71□□□□□ -0.53
SEC23B-202ENST00000336714 ZBTB8BQ8NAP8 495 aaPredicted RBP11.71□□□□□ -0.53
SEC23B-202ENST00000336714 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.71□□□□□ -0.534e-6■■■□□ 16.3
SEC23B-202ENST00000336714 MTA3Q9BTC8 594 aa11.71□□□□□ -0.53
SEC23B-202ENST00000336714 ZNF395Q9H8N7 513 aaPredicted RBP11.71□□□□□ -0.53
SEC23B-202ENST00000336714 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.53
SEC23B-202ENST00000336714 XPOTO43592 962 aaKnown RBP11.71□□□□□ -0.54
SEC23B-202ENST00000336714 ZWINTO95229 277 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 FGFR2P21802 821 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 GNA11P29992 359 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 PRDX5P30044 214 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 MAGEA4P43358 317 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 EPC2Q52LR7 807 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 RABGAP1LQ5R372 815 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 PCNX4Q63HM2 1172 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 NCCRP1Q6ZVX7 275 aaPredicted RBP11.71□□□□□ -0.54
SEC23B-202ENST00000336714 ZNF444Q8N0Y2 327 aaPredicted RBP11.71□□□□□ -0.54
SEC23B-202ENST00000336714 PPP2R3CQ969Q6 453 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 SLC35C1Q96A29 364 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 ZNF512BQ96KM6 892 aaPredicted RBP11.71□□□□□ -0.54
SEC23B-202ENST00000336714 RILPQ96NA2 401 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 HERPUD2Q9BSE4 406 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 LZTS1Q9Y250 596 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 RBMX2Q9Y388 322 aaKnown RBP11.71□□□□□ -0.54
SEC23B-202ENST00000336714 HEY1Q9Y5J3 304 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 AKAP11Q9UKA4 1901 aa11.71□□□□□ -0.54
SEC23B-202ENST00000336714 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 A0A0A6YYK5 440 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 LSM1O15116 133 aaKnown RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 ETS1P14921 441 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CTNNA2P26232 953 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 SSTR3P32745 418 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CYLC2Q14093 348 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 RASA2Q15283 850 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 GSTA3Q16772 222 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 KLHDC10Q6PID8 442 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CLEC4GQ6UXB4 293 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 TREML1Q86YW5 311 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CLEC10AQ8IUN9 316 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 ZBED8Q8IZ13 594 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 GSDMBQ8TAX9 411 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 RAB3IL1Q8TBN0 382 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 KAT5Q92993 513 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CNBD2Q96M20 576 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 SPZ1Q9BXG8 430 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 GPCPD1Q9NPB8 672 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 UBE2TQ9NPD8 197 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 ZNF148Q9UQR1 794 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 USTQ9Y2C2 406 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 ADGRA3Q8IWK6 1321 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 KAT6AQ92794 2004 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 C2CD2LO14523 706 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CDK4P11802 303 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 ZNF24P17028 368 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 VARSP26640 1264 aaKnown RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 PRKCIP41743 596 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CBWD6Q4V339 395 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CBWD3Q5JTY5 395 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CBWD5Q5RIA9 395 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 KLC3Q6P597 504 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 TSHZ1Q6ZSZ6 1077 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CCDC110Q8TBZ0 833 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 TMEM47Q9BQJ4 181 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 RUSC1Q9BVN2 902 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 NUP85Q9BW27 656 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 TSSK1BQ9BXA7 367 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 TUBGCP4Q9UGJ1 667 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 LTN1O94822 1766 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 LRP6O75581 1613 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CAPN8A6NHC0 703 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 PDE8AO60658 829 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CLPTM1O96005 669 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 BGNP21810 368 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 GJA8P48165 433 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 ARL4CP56559 192 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 NAA20P61599 178 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 IRX4P78413 519 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 SLC25A3Q00325 362 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 CHRNDQ07001 517 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 PEX6Q13608 980 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 GK3PQ14409 553 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 PDK3Q15120 406 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 NADK2Q4G0N4 442 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 NANOGNBQ7Z5D8 188 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 TCP10LQ8TDR4 215 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 MORC4Q8TE76 937 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 INIPQ9NRY2 104 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 DDX25Q9UHL0 483 aaKnown RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 BARX2Q9UMQ3 279 aaPredicted RBP11.7□□□□□ -0.54
SEC23B-202ENST00000336714 MEGF6O75095 1541 aa11.7□□□□□ -0.54
SEC23B-202ENST00000336714 H0YIN7 160 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 CCDC166P0CW27 439 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 CYTH1Q15438 398 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 KLHL35Q6PF15 583 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 C1orf228Q6PIY5 440 aa11.69□□□□□ -0.54
SEC23B-202ENST00000336714 CYFIP1Q7L576 1253 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms