RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PAIP1Q9H074 479 aaKnown RBP10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 DFFAO00273 331 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 PSMD14O00487 310 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 RALBP11234 206 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 ADARP55265 1226 aaKnown RBP10.28□□□□□ -0.76
COL4A6-201ENST00000334504 USP10Q14694 798 aaKnown RBP10.28□□□□□ -0.76
COL4A6-201ENST00000334504 NANOGNBQ7Z5D8 188 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 SP110Q9HB58 689 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 BTBD7Q9P203 1132 aa10.28□□□□□ -0.76
COL4A6-201ENST00000334504 KDM5DQ9BY66 1539 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 KRT87PA6NCN2 255 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 PSMA4P25789 261 aaKnown RBP10.27□□□□□ -0.76
COL4A6-201ENST00000334504 GPC3P51654 580 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 ITGA8P53708 1063 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 KCNK10P57789 538 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 SLC29A2Q14542 456 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 COG2Q14746 738 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 FAM102AQ5T9C2 384 aaPredicted RBP10.27□□□□□ -0.76
COL4A6-201ENST00000334504 IPPQ9Y573 584 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 STK36Q9NRP7 1315 aa10.27□□□□□ -0.76
COL4A6-201ENST00000334504 ARHGEF37A1IGU5 675 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 PP2D1A8MPX8 630 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 MFN2O95140 757 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 TBXAS1P24557 533 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-201ENST00000334504 BFSP2Q13515 415 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 FUT11Q495W5 492 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 PDXDC2PQ6P474 469 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 PKN3Q6P5Z2 889 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 COL23A1Q86Y22 540 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-201ENST00000334504 C19orf60Q96EN9 201 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 GPR101Q96P66 508 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-201ENST00000334504 FAM118BQ9BPY3 351 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 NEDD4P46934 1319 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 ADGRA3Q8IWK6 1321 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 SMAPO00193 183 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 TLR2O60603 784 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 KCNQ4P56696 695 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 FMR1Q06787 632 aaKnown RBP eCLIP10.27□□□□□ -0.77
COL4A6-201ENST00000334504 EFHC2Q5JST6 749 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 NLRP9Q7RTR0 991 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 ARL10Q8N8L6 244 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 ORAI2Q96SN7 254 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 TRIM54Q9BYV2 358 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 DCLRE1BQ9H816 532 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 CYLDQ9NQC7 956 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 ZNF804BA4D1E1 1349 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 TSPOAP1O95153 1857 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 C1orf232A0A0U1RR37 186 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 CYP26A1O43174 497 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 ALDH1B1P30837 517 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 SLC18A3Q16572 532 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 TXNRD1Q16881 649 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 C3orf62Q6ZUJ4 267 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 CYB5R4Q7L1T6 521 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 PACS2Q86VP3 889 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 METTL16Q86W50 562 aaKnown RBP10.27□□□□□ -0.77
COL4A6-201ENST00000334504 CASKIN2Q8WXE0 1202 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 KCNB2Q92953 911 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 FUT8Q9BYC5 575 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 RMI1Q9H9A7 625 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 ARHGEF3Q9NR81 526 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 SNX13Q9Y5W8 968 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 POTECB2RU33 542 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 KIF28PB7ZC32 967 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 SARSP49591 514 aaKnown RBP10.27□□□□□ -0.77
COL4A6-201ENST00000334504 CLEC17AQ6ZS10 378 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 RIBC1Q8N443 379 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-201ENST00000334504 TNIP2Q8NFZ5 429 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 HES6Q96HZ4 224 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 SENP7Q9BQF6 1050 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 RERGLQ9H628 205 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 PPCSQ9HAB8 311 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 ADGRA2Q96PE1 1338 aa10.27□□□□□ -0.77
COL4A6-201ENST00000334504 ZNF23P17027 643 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 IL12RB1P42701 662 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PWP1Q13610 501 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 TNFAIP1Q13829 316 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 MAPK11Q15759 364 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PROSER3Q2NL68 480 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 MFSD4BQ5TF39 518 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 C19orf18Q8NEA5 215 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 RBM46Q8TBY0 533 aaKnown RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 REXO4Q9GZR2 422 aaKnown RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SPRTNQ9H040 489 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 ITIH6Q6UXX5 1313 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 APRTP07741 180 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SERPINB5P36952 375 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PRELPP51888 382 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 DCAF4L1Q3SXM0 396 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PADI6Q6TGC4 694 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 TRIM72Q6ZMU5 477 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SUGP1Q8IWZ8 645 aaKnown RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 SH3KBP1Q96B97 665 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 KIAA1586Q9HCI6 787 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 PIH1D3Q9NQM4 214 aaKnown RBP10.26□□□□□ -0.77
COL4A6-201ENST00000334504 AGPAT5Q9NUQ2 364 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 DCDC2Q9UHG0 476 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 CDY2AQ9Y6F7 541 aa10.26□□□□□ -0.77
COL4A6-201ENST00000334504 CDY1Q9Y6F8 540 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms