RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 RCN1Q15293 331 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 ODR4Q5SWX8 454 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 SYDE2Q5VT97 1194 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 ZNF365Q70YC5 407 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 SLC47A2Q86VL8 602 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 TPH2Q8IWU9 490 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 SYCP3Q8IZU3 236 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 ZCCHC9Q8N567 271 aaKnown RBP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 NRG4Q8WWG1 115 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 RBM15Q96T37 977 aaKnown RBP eCLIP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 TUBB6Q9BUF5 446 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 STRA6Q9BX79 667 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
UPK3B-202ENST00000334348 R3HDM2Q9Y2K5 976 aaKnown RBP17.25■□□□□ 0.35
UPK3B-202ENST00000334348 CYP26A1O43174 497 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 RNF8O76064 485 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 SLC34A1Q06495 639 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 PICALMQ13492 652 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 SLC1A5Q15758 541 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 DSTYKQ6XUX3 929 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 ANKS1BQ7Z6G8 1248 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 MTDHQ86UE4 582 aaKnown RBP17.24■□□□□ 0.35
UPK3B-202ENST00000334348 DRAXINQ8NBI3 349 aaPredicted RBP17.24■□□□□ 0.35
UPK3B-202ENST00000334348 PHC3Q8NDX5 983 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 FLAD1Q8NFF5 587 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 ZNF75CPQ92670 426 aaPredicted RBP17.24■□□□□ 0.35
UPK3B-202ENST00000334348 SLC5A5Q92911 643 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 FGD4Q96M96 766 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 GORASP1Q9BQQ3 440 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 BTBD10Q9BSF8 475 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 SERPINB13Q9UIV8 391 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 MAGEA13PA6NCF6 341 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 IL1R1P14778 569 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 GCLMP48507 274 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 GRAPQ13588 217 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 PKN2Q16513 984 aaKnown RBP17.24■□□□□ 0.35
UPK3B-202ENST00000334348 FYB2Q5VWT5 728 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 FOXB2Q5VYV0 432 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.24■□□□□ 0.35
UPK3B-202ENST00000334348 GRAPLQ8TC17 118 aaPredicted RBP17.24■□□□□ 0.35
UPK3B-202ENST00000334348 TIPINQ9BVW5 301 aa17.24■□□□□ 0.35
UPK3B-202ENST00000334348 COL24A1Q17RW2 1714 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 FAM196BA6NMK8 535 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 TYROBPO43914 113 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 KRT15P19012 456 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 CA4P22748 312 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 MAPK4P31152 587 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 SHMT1P34896 483 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 CACNA2D1P54289 1103 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 POLE2P56282 527 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 CCNG2Q16589 344 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 MFSD14BQ5SR56 506 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 HHATQ5VTY9 493 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 ACAD10Q6JQN1 1059 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 LRRC74BQ6ZQY2 392 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 CYP2W1Q8TAV3 490 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 GATA6Q92908 595 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 DYDC2Q96IM9 177 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 TTC25Q96NG3 672 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 FAM192AQ9GZU8 254 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 ACP6Q9NPH0 428 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 ZBTB39O15060 712 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 GSC2O15499 205 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 KLF1Q13351 362 aaPredicted RBP17.23■□□□□ 0.35
UPK3B-202ENST00000334348 LAMB3Q13751 1172 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 ACSBG2Q5FVE4 666 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 C1orf220Q5T0J3 134 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 C4orf33Q8N1A6 199 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 KREMEN1Q96MU8 473 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 KCND2Q9NZV8 630 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 ANAPC7Q9UJX3 599 aa17.23■□□□□ 0.35
UPK3B-202ENST00000334348 PMM2O15305 246 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 KRT36O76013 467 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 TJP3O95049 919 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 TROVE2P10155 538 aaKnown RBP eCLIP17.22■□□□□ 0.35
UPK3B-202ENST00000334348 FGFR1P11362 822 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 CYP11B1P15538 503 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 KCNA3P22001 575 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 ADSSP30520 456 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 SLC1A1P43005 524 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 AP1B1Q10567 949 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 DYNC1I2Q13409 638 aaKnown RBP17.22■□□□□ 0.35
UPK3B-202ENST00000334348 CUL3Q13618 768 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 PLEKHG4Q58EX7 1191 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 SESTD1Q86VW0 696 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 SHC3Q92529 594 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 PTCD3Q96EY7 689 aaKnown RBP17.22■□□□□ 0.35
UPK3B-202ENST00000334348 DDX27Q96GQ7 796 aaKnown RBP17.22■□□□□ 0.35
UPK3B-202ENST00000334348 AMNQ9BXJ7 453 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 SYNCQ9H7C4 482 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 NPHS2Q9NP85 383 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 PDP2Q9P2J9 529 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 DAGLAQ9Y4D2 1042 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 NUMBLQ9Y6R0 609 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 F5H6K3 240 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 POC1B-GALNT4F8VUJ3 575 aa17.22■□□□□ 0.35
UPK3B-202ENST00000334348 POLRMTO00411 1230 aaKnown RBP17.22■□□□□ 0.35
UPK3B-202ENST00000334348 CAPN9O14815 690 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms