RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ZIM3Q96PE6 472 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 UBE2TQ9NPD8 197 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 METTL5Q9NRN9 209 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 PARVAQ9NVD7 372 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 CAMSAP1Q5T5Y3 1602 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 F5H423 210 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 DDHD2O94830 711 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 ABI1Q8IZP0 508 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 CMTR1Q8N1G2 835 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 RNF139Q8WU17 664 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 ATXN2LQ8WWM7 1075 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 RNF26Q9BY78 433 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 HDHD2Q9H0R4 259 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 SEPT9Q9UHD8 586 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 GSCP56915 257 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 NDNQ99608 321 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 CYP39A1Q9NYL5 469 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 ZHX2Q9Y6X8 837 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 NFKBIAP25963 317 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 RPL5P46777 297 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 PWP1Q13610 501 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 ALKBH5Q6P6C2 394 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 ELOA2Q8IYF1 753 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 FNIP1Q8TF40 1166 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 AKT3Q9Y243 479 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 AK5Q9Y6K8 562 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 HNRNPDLO14979 420 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 RALBP11234 206 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 NR2F2P24468 414 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 THEMIS2Q5TEJ8 643 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.81□□□□□ -0.684e-7■□□□□ 8.2
SPTBN1-201ENST00000333896 CHCHD4Q8N4Q1 142 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 CAPSLQ8WWF8 208 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 FAM162AQ96A26 154 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 GPBP1L1Q9HC44 474 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 SAMSN1Q9NSI8 373 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 LRRC53A6NM62 1247 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 TM9SF1O15321 606 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 ITIH2P19823 946 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 CASP5P51878 434 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 RESTQ13127 1097 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 OASLQ15646 514 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 PTPN21Q16825 1174 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 TEX13BQ9BXU2 312 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 CASZ1Q86V15 1759 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 PCP4L1A6NKN8 68 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 PEX14O75381 377 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 CD2BP2O95400 341 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 COG2Q14746 738 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 WDR36Q8NI36 951 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 CHID1Q9BWS9 393 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 ATP8B3O60423 1300 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 TNKSO95271 1327 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 IRS4O14654 1257 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 SNAPC5O75971 98 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 USP1O94782 785 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 OSCARQ8IYS5 282 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 DNAJC7Q99615 494 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 LRRC1Q9BTT6 524 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 BCL2L14Q9BZR8 327 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 BTBD3Q9Y2F9 522 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 MROH7Q68CQ1 1323 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 A0A1B0GTH6 734 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 ATP1A1P05023 1023 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 AKAP5P24588 427 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 YWHABP31946 246 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 SOX11P35716 441 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 FAAH2Q6GMR7 532 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 ANKS3Q6ZW76 656 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 DLG3Q92796 817 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 SH3KBP1Q96B97 665 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 ZNF496Q96IT1 587 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 LRRC4Q9HBW1 653 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 SNTNA6NMZ2 147 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 ZBTB39O15060 712 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 APOA4P06727 396 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 PSMA2P25787 234 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 ZNF786Q8N393 782 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 MAD2L2Q9UI95 211 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 EFR3BQ9Y2G0 817 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 NPTXRO95502 500 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 CCNHP51946 323 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 TRIM32Q13049 653 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 CCDC157Q569K6 752 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 BLIDQ8IZY5 108 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 ATL2Q8NHH9 583 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 HMGXB3Q12766 1538 aa10.81□□□□□ -0.68
SPTBN1-201ENST00000333896 C1orf232A0A0U1RR37 186 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 CCNE1P24864 410 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TALDO1P37837 337 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ORC2Q13416 577 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 FASTKD1Q53R41 847 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 TCAIMQ8N3R3 496 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 C8orf58Q8NAV2 365 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 ACAP3Q96P50 834 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 PSTPIP2Q9H939 334 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 KLHL8Q9P2G9 620 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 THRAP3Q9Y2W1 955 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 PCDHGA3Q9Y5H0 932 aa10.8□□□□□ -0.68
SPTBN1-201ENST00000333896 CCDC162PA2VCL2 907 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms