RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZNFX1Q9P2E3 1918 aaKnown RBP25.06■■□□□ 1.6
TSKU-201ENST00000333090 H0Y3Z8 333 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 CBX6O95503 412 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 ALDH3A1P30838 453 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 SLC1A1P43005 524 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 GTF2BQ00403 316 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 RIBC1Q8N443 379 aaPredicted RBP25.06■■□□□ 1.6
TSKU-201ENST00000333090 TMEM174Q8WUU8 243 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 NUDCD1Q96RS6 583 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 TBC1D10AQ9BXI6 508 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 CYP39A1Q9NYL5 469 aa25.06■■□□□ 1.6
TSKU-201ENST00000333090 ATRNL1Q5VV63 1379 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 EPHB2P29323 1055 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 ADSSP30520 456 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 SSR1P43307 286 aaKnown RBP25.05■■□□□ 1.6
TSKU-201ENST00000333090 GPC3P51654 580 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 CCNG2Q16589 344 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 KRT27Q7Z3Y8 459 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 LONP2Q86WA8 852 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 STK32AQ8WU08 396 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 CFAP57Q96MR6 1250 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 YIPF3Q9GZM5 350 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 KIAA1586Q9HCI6 787 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 TMEM8AQ9HCN3 771 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 GRID1Q9ULK0 1009 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 MAGEB2O15479 319 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 DCTN3O75935 186 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 P4HBP07237 508 aaKnown RBP25.05■■□□□ 1.6
TSKU-201ENST00000333090 GCAP28676 217 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 LRRC8CQ8TDW0 803 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 FAM84AQ96KN4 292 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 LTBP1Q14766 1721 aa25.05■■□□□ 1.6
TSKU-201ENST00000333090 TPBGLP0DKB5 382 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 FDX1P10109 184 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 TRAF1Q13077 416 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 PKN2Q16513 984 aaKnown RBP25.04■■□□□ 1.6
TSKU-201ENST00000333090 SLC27A3Q5K4L6 730 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 RELL1Q8IUW5 271 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 RIT2Q99578 217 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 OSBPL8Q9BZF1 889 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 ZFATQ9P243 1243 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 UNGP13051 313 aaPredicted RBP25.04■■□□□ 1.6
TSKU-201ENST00000333090 ITGB5P18084 799 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 CD58P19256 250 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 RPA3P35244 121 aaPredicted RBP25.04■■□□□ 1.6
TSKU-201ENST00000333090 ZCCHC9Q8N567 271 aaKnown RBP25.04■■□□□ 1.6
TSKU-201ENST00000333090 DENND1AQ8TEH3 1009 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 INPP5DQ92835 1189 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 SLC7A6OSQ96CW6 309 aaPredicted RBP25.04■■□□□ 1.6
TSKU-201ENST00000333090 SMC6Q96SB8 1091 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 KIFC3Q9BVG8 833 aa25.04■■□□□ 1.6
TSKU-201ENST00000333090 ENO4A6NNW6 628 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 ABHD2P08910 425 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 T-ENOLP0DO92 83 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 CA4P22748 312 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 PCK1P35558 622 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 PCNX4Q63HM2 1172 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 ZNF483Q8TF39 744 aaPredicted RBP25.03■■□□□ 1.6
TSKU-201ENST00000333090 ANKRD27Q96NW4 1050 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.03■■□□□ 1.6
TSKU-201ENST00000333090 USTQ9Y2C2 406 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 COQ4Q9Y3A0 265 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 EDF1O60869 148 aaKnown RBP25.03■■□□□ 1.6
TSKU-201ENST00000333090 NR1H3Q13133 447 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 FASTKD3Q14CZ7 662 aaKnown RBP25.03■■□□□ 1.6
TSKU-201ENST00000333090 ACER1Q8TDN7 264 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 FAM81BQ96LP2 452 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 MXRA8Q9BRK3 442 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 TDRD3Q9H7E2 651 aaKnown RBP25.03■■□□□ 1.6
TSKU-201ENST00000333090 KCNH7Q9NS40 1196 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 LRRC42Q9Y546 428 aa25.03■■□□□ 1.6
TSKU-201ENST00000333090 NPR1P16066 1061 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 KLRC2P26717 231 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 TAS2R40P59535 323 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 PDK4Q16654 411 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 ANKS1BQ7Z6G8 1248 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 GLIS1Q8NBF1 620 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 UBN1Q9NPG3 1134 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 AVENQ9NQS1 362 aaPredicted RBP25.02■■□□□ 1.6
TSKU-201ENST00000333090 CHRNA5P30532 468 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 NSFP46459 744 aaKnown RBP25.02■■□□□ 1.6
TSKU-201ENST00000333090 SV2AQ7L0J3 742 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 VPS37BQ9H9H4 285 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 KLHL11Q9NVR0 708 aa25.02■■□□□ 1.6
TSKU-201ENST00000333090 MRPL11Q9Y3B7 192 aaKnown RBP25.02■■□□□ 1.6
TSKU-201ENST00000333090 PRPF4O43172 522 aaKnown RBP eCLIP25.01■■□□□ 1.59
TSKU-201ENST00000333090 PROSCO94903 275 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 LINGO3P0C6S8 592 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 FAM102BQ5T8I3 360 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 TTC8Q8TAM2 541 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 FHDC1Q9C0D6 1143 aaPredicted RBP25.01■■□□□ 1.59
TSKU-201ENST00000333090 A6NHS1 94 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 ENTPD5O75356 428 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 ZSCAN5DPP0CG00 497 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 CNGA1P29973 690 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 SLC1A5Q15758 541 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.01■■□□□ 1.59
TSKU-201ENST00000333090 RHOT1Q8IXI2 618 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 C10orf82Q8WW14 230 aa25.01■■□□□ 1.59
TSKU-201ENST00000333090 IWS1Q96ST2 819 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms