RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 ZNF507Q8TCN5 953 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 SCFD1Q8WVM8 642 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 BICD1Q96G01 975 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 CEP63Q96MT8 703 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 UROC1Q96N76 676 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 ACO2Q99798 780 aaKnown RBP10.57□□□□□ -0.72
SYN3-201ENST00000332840 PTPRHQ9HD43 1115 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 RTN4Q9NQC3 1192 aaKnown RBP10.57□□□□□ -0.72
SYN3-201ENST00000332840 MRPL17Q9NRX2 175 aaKnown RBP10.57□□□□□ -0.72
SYN3-201ENST00000332840 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 DZANK1Q9NVP4 752 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 PRG3Q9Y2Y8 225 aaPredicted RBP10.57□□□□□ -0.72
SYN3-201ENST00000332840 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
SYN3-201ENST00000332840 CFAP54Q96N23 3096 aa10.57□□□□□ -0.72
SYN3-201ENST00000332840 SF3B1O75533 1304 aaKnown RBP eCLIP10.57□□□□□ -0.72
SYN3-201ENST00000332840 WDR87Q6ZQQ6 2873 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 USP34Q70CQ2 3546 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 PLXNA4Q9HCM2 1894 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 C2orf71A6NGG8 1288 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 SFI1A8K8P3 1242 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 HIDE1A8MVS5 230 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 PDXKO00764 312 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 CLDN3O15551 220 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 CALUO43852 315 aaPredicted RBP10.56□□□□□ -0.72
SYN3-201ENST00000332840 TBX10O75333 385 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 GCNT3O95395 438 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 CXCL14O95715 111 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 C1RP00736 705 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 SOD2P04179 222 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 LTBRP36941 435 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 MTIF2P46199 727 aaKnown RBP10.56□□□□□ -0.72
SYN3-201ENST00000332840 AFF1P51825 1210 aaKnown RBP10.56□□□□□ -0.72
SYN3-201ENST00000332840 ALCAMQ13740 583 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 NOLC1Q14978 699 aaKnown RBP eCLIP10.56□□□□□ -0.72
SYN3-201ENST00000332840 SMAD2Q15796 467 aaKnown RBP10.56□□□□□ -0.72
SYN3-201ENST00000332840 KNOP1Q1ED39 458 aaKnown RBP10.56□□□□□ -0.72
SYN3-201ENST00000332840 EDRF1Q3B7T1 1238 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 ZCWPW2Q504Y3 356 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 EEF1DP3Q658K8 133 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 KIAA1841Q6NSI8 718 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 PDXDC1Q6P996 788 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 ZNF720Q7Z2F6 126 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 HAUS6Q7Z4H7 955 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 TMEM173Q86WV6 379 aaPredicted RBP10.56□□□□□ -0.72
SYN3-201ENST00000332840 CREBRFQ8IUR6 639 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 NELFCDQ8IXH7 590 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 FAM178BQ8IXR5 827 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 GJD3Q8N144 294 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 SMRP1Q8NCR6 262 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 CCDC150Q8NCX0 1101 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 GSTCDQ8NEC7 633 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 HVCN1Q96D96 273 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 MSLNLQ96KJ4 702 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 CNOT6LQ96LI5 555 aaKnown RBP10.56□□□□□ -0.72
SYN3-201ENST00000332840 HERC2P3Q9BVR0 1158 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 TARS2Q9BW92 718 aaKnown RBP10.56□□□□□ -0.72
SYN3-201ENST00000332840 FGFBP2Q9BYJ0 223 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 CDT1Q9H211 546 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 VPS16Q9H269 839 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 KCTD10Q9H3F6 313 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.56□□□□□ -0.72
SYN3-201ENST00000332840 INTS13Q9NVM9 706 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 SNTG2Q9NY99 539 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 TAB2Q9NYJ8 693 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 ADAM28Q9UKQ2 775 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 TRAF3IP3Q9Y228 551 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 EVPLQ92817 2033 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 ARID2Q68CP9 1835 aa10.56□□□□□ -0.72
SYN3-201ENST00000332840 K7ENM7 598 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 HNRNPDLO14979 420 aaKnown RBP10.55□□□□□ -0.72
SYN3-201ENST00000332840 PER2O15055 1255 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 CETN3O15182 167 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 TEX33O43247 280 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 NRDCO43847 1150 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 B4GALT3O60512 393 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 PRPF6O94906 941 aaKnown RBP10.55□□□□□ -0.72
SYN3-201ENST00000332840 GNA14O95837 355 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 ADH1AP07327 375 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 MYBP10242 640 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 PROZP22891 400 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 NMT1P30419 496 aaKnown RBP10.55□□□□□ -0.72
SYN3-201ENST00000332840 GTF2F1P35269 517 aaKnown RBP eCLIP10.55□□□□□ -0.72
SYN3-201ENST00000332840 GLUD2P49448 558 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 LIG4P49917 911 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 HSP90AA2PQ14568 343 aaPredicted RBP10.55□□□□□ -0.72
SYN3-201ENST00000332840 PTPN14Q15678 1187 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 USP41Q3LFD5 358 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 SPECC1LQ69YQ0 1117 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 TAS1R3Q7RTX0 852 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 LRRC8AQ8IWT6 810 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 ZC3H3Q8IXZ2 948 aaKnown RBP10.55□□□□□ -0.72
SYN3-201ENST00000332840 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
SYN3-201ENST00000332840 ACAP3Q96P50 834 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 TSPAN18Q96SJ8 248 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 FIZ1Q96SL8 496 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 TUBGCP2Q9BSJ2 902 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 ST6GALNAC4Q9H4F1 302 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 MARCH5Q9NX47 278 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 KLK14Q9P0G3 267 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms