RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C1QTNF1Q9BXJ1 281 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 POLR3FQ9H1D9 316 aaPredicted RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 FZD8Q9H461 694 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 MINDY3Q9H8M7 445 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 ALG13Q9NP73 1137 aaKnown RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 TBC1D13Q9NVG8 400 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 CLDND1Q9NY35 253 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 CD207Q9UJ71 328 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SMC3Q9UQE7 1217 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 GIT1Q9Y2X7 761 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 ARHGEF35A5YM69 484 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 C9orf172C9J069 976 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 ZBTB39O15060 712 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 USO1O60763 962 aaKnown RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 LILRB5O75023 590 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 ATP2B1P20020 1258 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 CCT6AP40227 531 aaKnown RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 BCAR1P56945 870 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 DSC1Q08554 894 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 ZNF211Q13398 564 aaPredicted RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 HIF1AQ16665 826 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 DTHD1Q6ZMT9 781 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 AGMOQ6ZNB7 445 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 ADHFE1Q8IWW8 467 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SMG8Q8ND04 991 aaKnown RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 PIGOQ8TEQ8 1089 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 BHMTQ93088 406 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 TMEM169Q96HH4 297 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 IGSF21Q96ID5 467 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 DRC1Q96MC2 740 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 BACH2Q9BYV9 841 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 RHOBTB2Q9BYZ6 727 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SAP130Q9H0E3 1048 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 CCDC113Q9H0I3 377 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 TLE6Q9H808 572 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SLC6A14Q9UN76 642 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 SSX2IPQ9Y2D8 614 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 PCDHB6Q9Y5E3 794 aa6.99□□□□□ -1.29
SMG1-201ENST00000330588 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.99□□□□□ -1.29
SMG1-201ENST00000330588 A0A0A0MRY4 1105 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 H3BQV1 296 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 INO80B-WBP1J3KQ70 363 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 MBTPS2O43462 519 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 TBX10O75333 385 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 CSDE1O75534 798 aaKnown RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 PAPLNO95428 1278 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 EFEMP2O95967 443 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 GALTP07902 379 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 CTSAP10619 480 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 ITGA4P13612 1032 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 ARF4P18085 180 aaPredicted RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 GUCY2CP25092 1073 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 ABCD1P33897 745 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 GRIK3Q13003 919 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 MTMR3Q13615 1198 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 NAA30Q147X3 362 aaPredicted RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 MAPK6Q16659 721 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 DCAF4L1Q3SXM0 396 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 CYP26C1Q6V0L0 522 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 PPFIBP1Q86W92 1011 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 RNF168Q8IYW5 571 aaPredicted RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 MRPL43Q8N983 215 aaKnown RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 SNX29Q8TEQ0 813 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 SUSD6Q92537 303 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 CASP10Q92851 521 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 ZNF668Q96K58 619 aaPredicted RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 IFT74Q96LB3 600 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 ADPGKQ9BRR6 497 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 NTPCRQ9BSD7 190 aaKnown RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 GZF1Q9H116 711 aaPredicted RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 ZBP1Q9H171 429 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 NRDE2Q9H7Z3 1164 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 DZANK1Q9NVP4 752 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 DMGDHQ9UI17 866 aaKnown RBP6.98□□□□□ -1.29
SMG1-201ENST00000330588 DNM3Q9UQ16 869 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 IPPQ9Y573 584 aa6.98□□□□□ -1.29
SMG1-201ENST00000330588 LRRIQ4A6NIV6 560 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.97□□□□□ -1.29
SMG1-201ENST00000330588 PI4K2BG5E9Z4 385 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 H0YCG3 227 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 ACKR2O00590 384 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 DTNBO60941 627 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 GLP2RO95838 553 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 H2AFB1P0C5Y9 115 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 H2AFB2P0C5Z0 115 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 LONP1P36776 959 aaKnown RBP6.97□□□□□ -1.29
SMG1-201ENST00000330588 NRIP1P48552 1158 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 NDUFV1P49821 464 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 ERVFC1P60507 584 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 CREMQ03060 361 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 RNASELQ05823 741 aaKnown RBP6.97□□□□□ -1.29
SMG1-201ENST00000330588 ZP2Q05996 745 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 ITIH3Q06033 890 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 CBX2Q14781 532 aaPredicted RBP6.97□□□□□ -1.29
SMG1-201ENST00000330588 LARP1BQ659C4 914 aaKnown RBP6.97□□□□□ -1.29
SMG1-201ENST00000330588 ADGRD2Q7Z7M1 963 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 COLGALT2Q8IYK4 626 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 RNF169Q8NCN4 708 aa6.97□□□□□ -1.29
SMG1-201ENST00000330588 FAM193BQ96PV7 902 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms