RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TLR3O15455 904 aaKnown RBP13.71□□□□□ -0.22
DDX39A-202ENST00000324340 KIF1CO43896 1103 aaKnown RBP13.71□□□□□ -0.22
DDX39A-202ENST00000324340 TNNC2P02585 160 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 TMEM191BP0C7N4 346 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 SELPP16109 830 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 CD52P31358 61 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 PIK3CAP42336 1068 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 YARSP54577 528 aaKnown RBP13.71□□□□□ -0.22
DDX39A-202ENST00000324340 GCNT1Q02742 428 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 NFX1Q12986 1120 aaKnown RBP13.71□□□□□ -0.22
DDX39A-202ENST00000324340 BIRC3Q13489 604 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 NCOA4Q13772 614 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 MBTPS1Q14703 1052 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 ZBTB6Q15916 424 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 TWF2Q6IBS0 349 aaKnown RBP13.71□□□□□ -0.22
DDX39A-202ENST00000324340 JADE1Q6IE81 842 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 FMNL3Q8IVF7 1028 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 ARHGEF19Q8IW93 802 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 CXorf38Q8TB03 319 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 ANKRD36BP1Q96IX9 119 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 NT5C1BQ96P26 610 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 SPAG5Q96R06 1193 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 FUT8Q9BYC5 575 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 ACBD3Q9H3P7 528 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 FAM105AQ9NUU6 356 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 TRMT1Q9NXH9 659 aaKnown RBP13.71□□□□□ -0.22
DDX39A-202ENST00000324340 HES2Q9Y543 173 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.22
DDX39A-202ENST00000324340 TANC1Q9C0D5 1861 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 SOWAHDA6NJG2 315 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 POLR3GO15318 223 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-202ENST00000324340 ZNF623O75123 536 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 ERLIN1O75477 346 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 CAPN15O75808 1086 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 RECQL4O94761 1208 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 ASS1P00966 412 aaKnown RBP13.7□□□□□ -0.22
DDX39A-202ENST00000324340 KCNE1P15382 129 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 SOX5P35711 763 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 PRKCIP41743 596 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 PSEN1P49768 467 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 RAB27AP51159 221 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 CORO7P57737 925 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 TFAMQ00059 246 aaKnown RBP13.7□□□□□ -0.22
DDX39A-202ENST00000324340 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-202ENST00000324340 DRAP1Q14919 205 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-202ENST00000324340 TMEM132DQ14C87 1099 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 HGSNATQ68CP4 663 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 RAD9BQ6WBX8 426 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 LRRC8DQ7L1W4 858 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 ENOSF1Q7L5Y1 443 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 MRPL10Q7Z7H8 261 aaKnown RBP13.7□□□□□ -0.22
DDX39A-202ENST00000324340 C10orf67Q8IYJ2 551 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 GOLGA1Q92805 767 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 JAKMIP2Q96AA8 810 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 FAXDC2Q96IV6 333 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 CHP1Q99653 195 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 UBE2TQ9NPD8 197 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-202ENST00000324340 ARHGAP20Q9P2F6 1191 aa13.7□□□□□ -0.22
DDX39A-202ENST00000324340 CENPFP49454 3210 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 SSU72P8A0A1W2PR75 194 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 MGEA5O60502 916 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 PHACTR2O75167 634 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 CST3P01034 146 aaPredicted RBP13.69□□□□□ -0.22
DDX39A-202ENST00000324340 SERPING1P05155 500 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 STAT1P42224 750 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 MFAP3P55082 362 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 SGSM1Q2NKQ1 1148 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 IRF2BP2Q7Z5L9 587 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 CCDC170Q8IYT3 715 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 DIS3LQ8TF46 1054 aaKnown RBP13.69□□□□□ -0.22
DDX39A-202ENST00000324340 SHC3Q92529 594 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 TAF4BQ92750 862 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 TATDN2Q93075 761 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 KREMEN1Q96MU8 473 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 ZMAT2Q96NC0 199 aaKnown RBP13.69□□□□□ -0.22
DDX39A-202ENST00000324340 PI4K2AQ9BTU6 479 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 XYLT2Q9H1B5 865 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 APOBEC3GQ9HC16 384 aaKnown RBP13.69□□□□□ -0.22
DDX39A-202ENST00000324340 C1orf112Q9NSG2 853 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 SIX4Q9UIU6 781 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 ITGA11Q9UKX5 1188 aa13.69□□□□□ -0.22
DDX39A-202ENST00000324340 BZW2Q9Y6E2 419 aaKnown RBP13.69□□□□□ -0.22
DDX39A-202ENST00000324340 A0A0U1RQF3 1178 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 DCDC2CA8MYV0 355 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 TULP1O00294 542 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-202ENST00000324340 PQBP1O60828 265 aaKnown RBP13.68□□□□□ -0.22
DDX39A-202ENST00000324340 STAU1O95793 577 aaKnown RBP13.68□□□□□ -0.22
DDX39A-202ENST00000324340 SKIP12755 728 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 FERP16591 822 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 AKAP5P24588 427 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 USP8P40818 1118 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 GSCP56915 257 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-202ENST00000324340 NOP14P78316 857 aaKnown RBP13.68□□□□□ -0.22
DDX39A-202ENST00000324340 FAAP100Q0VG06 881 aa13.68□□□□□ -0.22
DDX39A-202ENST00000324340 MTF1Q14872 753 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms