RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 SGSM1Q2NKQ1 1148 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 SLC27A1Q6PCB7 646 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 REM2Q8IYK8 340 aaPredicted RBP19.74■□□□□ 0.75
USP39-201ENST00000323701 KLHDC9Q8NEP7 349 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 ZMAT2Q96NC0 199 aaKnown RBP19.74■□□□□ 0.75
USP39-201ENST00000323701 ACAP3Q96P50 834 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 MMS19Q96T76 1030 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 ADPGKQ9BRR6 497 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 CNTN6Q9UQ52 1028 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 CITO14578 2027 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 GRM5P41594 1212 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 DNA2P51530 1060 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 CDC42EP1Q00587 391 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 ZNF699Q32M78 642 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 FAM47CQ5HY64 1035 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 MAP3K21Q5TCX8 1036 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 IMPG2Q9BZV3 1241 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 SMARCAL1Q9NZC9 954 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 EHD2Q9NZN4 543 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 ATP8B3O60423 1300 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 THSD7BQ9C0I4 1608 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 ANKRD62A6NC57 917 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 NCANO14594 1321 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 KPNA6O60684 536 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 RAP1GAPP47736 663 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 RSRC2Q7L4I2 434 aaKnown RBP19.73■□□□□ 0.75
USP39-201ENST00000323701 RBBP8NLQ8NC74 664 aaPredicted RBP19.73■□□□□ 0.75
USP39-201ENST00000323701 NIF3L1Q9GZT8 377 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 ASB7Q9H672 318 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 SPC25Q9HBM1 224 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 NXF1Q9UBU9 619 aaKnown RBP19.73■□□□□ 0.75
USP39-201ENST00000323701 PIN4Q9Y237 131 aaKnown RBP19.73■□□□□ 0.75
USP39-201ENST00000323701 PCDHB2Q9Y5E7 798 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 A0A0A6YYK5 440 aaPredicted RBP19.73■□□□□ 0.75
USP39-201ENST00000323701 GNAT1P11488 350 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 ZNF394Q53GI3 561 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 MEI1Q5TIA1 1274 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 NOTUMQ6P988 496 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 CTNNBL1Q8WYA6 563 aaPredicted RBP19.73■□□□□ 0.75
USP39-201ENST00000323701 ANKRD7Q92527 254 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 ZSWIM1Q9BR11 485 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 RNF39Q9H2S5 420 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 HYOU1Q9Y4L1 999 aa19.73■□□□□ 0.75
USP39-201ENST00000323701 EFCAB8A8MWE9 144 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 RTN2O75298 545 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 CTSHP09668 335 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 TBXAS1P24557 533 aaPredicted RBP19.72■□□□□ 0.75
USP39-201ENST00000323701 AKAP5P24588 427 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 ZNF132P52740 706 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 CRYBB1P53674 252 aaPredicted RBP19.72■□□□□ 0.75
USP39-201ENST00000323701 TMEM132DQ14C87 1099 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 WHAMMP3Q1A5X7 153 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 C2CD6Q53TS8 623 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 UBXN11Q5T124 520 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 CREG2Q8IUH2 290 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 RFFLQ8WZ73 363 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 FAM81BQ96LP2 452 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 OSBPL9Q96SU4 736 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 CISHQ9NSE2 258 aa19.72■□□□□ 0.75
USP39-201ENST00000323701 NOC2LQ9Y3T9 749 aaKnown RBP19.72■□□□□ 0.75
USP39-201ENST00000323701 HMGCRP04035 888 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 GZMAP12544 262 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 ZSCAN20P17040 1043 aaPredicted RBP19.71■□□□□ 0.75
USP39-201ENST00000323701 MAP2K2P36507 400 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 CDH8P55286 799 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 WDR72Q3MJ13 1102 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 DCAF4L1Q3SXM0 396 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 FAM228AQ86W67 206 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 NOA1Q8NC60 698 aaKnown RBP19.71■□□□□ 0.75
USP39-201ENST00000323701 CPA5Q8WXQ8 436 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 APOL6Q9BWW8 343 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 CELF4Q9BZC1 486 aaKnown RBP19.71■□□□□ 0.75
USP39-201ENST00000323701 SDCBP2Q9H190 292 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 BUB1BO60566 1050 aaPredicted RBP19.71■□□□□ 0.75
USP39-201ENST00000323701 POLR2BP30876 1174 aaKnown RBP19.71■□□□□ 0.75
USP39-201ENST00000323701 TUBB2AQ13885 445 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 CLEC16AQ2KHT3 1053 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 GLRA4Q5JXX5 417 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 TEX35Q5T0J7 233 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 PASD1Q8IV76 773 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 CYFIP2Q96F07 1278 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 TUBB2BQ9BVA1 445 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 CDY2AQ9Y6F7 541 aa19.71■□□□□ 0.75
USP39-201ENST00000323701 PPEF2O14830 753 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 CHRNA1P02708 482 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 UNGP13051 313 aaPredicted RBP19.7■□□□□ 0.74
USP39-201ENST00000323701 GNA15P30679 374 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 POU5F1Q01860 360 aaKnown RBP19.7■□□□□ 0.74
USP39-201ENST00000323701 LLGL2Q6P1M3 1020 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 TAF2Q6P1X5 1199 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 SERINC5Q86VE9 423 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 NME8Q8N427 588 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 RAET1EQ8TD07 263 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 KIF12Q96FN5 646 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 MS4A14Q96JA4 679 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 MKI67P46013 3256 aaKnown RBP19.7■□□□□ 0.74
USP39-201ENST00000323701 RECQL4O94761 1208 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 MRPS6P82932 125 aaKnown RBP19.7■□□□□ 0.74
USP39-201ENST00000323701 ORC1Q13415 861 aa19.7■□□□□ 0.74
USP39-201ENST00000323701 SLFN11Q7Z7L1 901 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms