RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ARL8BQ9NVJ2 186 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 PKD2L1Q9P0L9 805 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 USTQ9Y2C2 406 aa10.25□□□□□ -0.77
PTPRA-202ENST00000318266 GYG2O15488 501 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 ZBED4O75132 1171 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 RNF8O76064 485 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 UFL1O94874 794 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 SKIP12755 728 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 ETS2P15036 469 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 LBRQ14739 615 aaKnown RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 SEPT7Q16181 437 aaKnown RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 EAPPQ56P03 285 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 WASHC2DQ5SRD0 308 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 CLEC4GQ6UXB4 293 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 ZNF720Q7Z2F6 126 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 LINC00116Q8NCU8 138 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 MAML1Q92585 1016 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 STMN2Q93045 179 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 FAM136AQ96C01 138 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 ANKRD27Q96NW4 1050 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 DCLK3Q9C098 648 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 GPBP1L1Q9HC44 474 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 DDX4Q9NQI0 724 aaKnown RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 MYH14Q7Z406 1995 aaKnown RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 E7ENQ6 273 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 DDX39AO00148 427 aaKnown RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 FSCN2O14926 492 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 EEF2P13639 858 aaKnown RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 ETS1P14921 441 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 CD58P19256 250 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 ADRA1DP25100 572 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 GCLCP48506 637 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 NOP14P78316 857 aaKnown RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 FMO1Q01740 532 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 RASA3Q14644 834 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 STAT4Q14765 748 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 MDH1BQ5I0G3 518 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 RASIP1Q5U651 963 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 LRRC74BQ6ZQY2 392 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 EZH1Q92800 747 aaPredicted RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 HAUS1Q96CS2 278 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 GBP5Q96PP8 586 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 PLVAPQ9BX97 442 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 LGALS13Q9UHV8 139 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 LRCH1Q9Y2L9 728 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 K7ENM7 598 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 KRT5P13647 590 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 KRT4P19013 534 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 CETN2P41208 172 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 VAMP7P51809 220 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 NEK3P51956 506 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 HADHBP55084 474 aaKnown RBP10.24□□□□□ -0.77
PTPRA-202ENST00000318266 CETN1Q12798 172 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 PTK6Q13882 451 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 MAPK6Q16659 721 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 SGSM1Q2NKQ1 1148 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 IRGCQ6NXR0 463 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 ANKMY2Q8IV38 441 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 CYTH2Q99418 400 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 TMEM117Q9H0C3 514 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 CD209Q9NNX6 404 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 ARMCX1Q9P291 453 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 HEY2Q9UBP5 337 aa10.24□□□□□ -0.77
PTPRA-202ENST00000318266 DDX60LQ5H9U9 1706 aaKnown RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 PI4K2BG5E9Z4 385 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 GAP43P17677 238 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 GCAP28676 217 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 NT5C2P49902 561 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 USP4Q13107 963 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 THOC5Q13769 683 aaKnown RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 EFTUD2Q15029 972 aaKnown RBP eCLIP10.23□□□□□ -0.771e-6■■■■■ 34.9
PTPRA-202ENST00000318266 PDK4Q16654 411 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 FAM182AQ5T1J6 154 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 GPATCH4Q5T3I0 446 aaKnown RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 FYB2Q5VWT5 728 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 C1orf186Q6ZWK4 172 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 TTC7BQ86TV6 843 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 KBTBD2Q8IY47 623 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 C12orf50Q8NA57 414 aaPredicted RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 ZNF75CPQ92670 426 aaPredicted RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 KREMEN1Q96MU8 473 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 NAP1L4Q99733 375 aaKnown RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 GORASP1Q9BQQ3 440 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 PCDH10Q9P2E7 1040 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 NOCTQ9UK39 431 aaKnown RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 VAV3Q9UKW4 847 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 ATAD5Q96QE3 1844 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 SCNN1DP51172 638 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 RBM5P52756 815 aaKnown RBP eCLIP10.23□□□□□ -0.778e-6■■■■□ 20.7
PTPRA-202ENST00000318266 CUL3Q13618 768 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 MTHFD1LQ6UB35 978 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 TPTE2Q6XPS3 522 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 ZBED8Q8IZ13 594 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 ATL2Q8NHH9 583 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 CPA5Q8WXQ8 436 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 MKNK1Q9BUB5 465 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms