RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SLFN12LQ6IEE8 588 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 CCDC149Q6ZUS6 474 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 ANKS3Q6ZW76 656 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 CD302Q8IX05 232 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 IQUBQ8NA54 791 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 CXorf38Q8TB03 319 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 LEO1Q8WVC0 666 aaPredicted RBP15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 SMG7Q92540 1137 aaKnown RBP15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 TSPAN18Q96SJ8 248 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 CBWD1Q9BRT8 395 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 ASB7Q9H672 318 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 FBXL5Q9UKA1 691 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 HPSEQ9Y251 543 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 NR2E1Q9Y466 385 aa15.87■□□□□ 0.13
PPP1CA-201ENST00000312989 CLUHO75153 1309 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 FAM237AA0A1B0GTK4 181 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 PIRO00625 290 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 POLR2DO15514 142 aaKnown RBP15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 ACTN4O43707 911 aaKnown RBP15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 ASGR2P07307 311 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 C8AP07357 584 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 ME1P48163 572 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 C9orf57Q5W0N0 161 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 POTEHQ6S545 545 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 TRIM67Q6ZTA4 783 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 HFE2Q6ZVN8 426 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 TDRD5Q8NAT2 981 aaKnown RBP15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 BORCS6Q96GS4 357 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 FAM84AQ96KN4 292 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 ACCSQ96QU6 501 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 MYADMQ96S97 322 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 TSHZ2Q9NRE2 1034 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 DPP7Q9UHL4 492 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 CFAP45Q9UL16 551 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 PCDHB8Q9UN66 801 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 DERAQ9Y315 318 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 C2CD2Q9Y426 696 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 WDFY4Q6ZS81 3184 aa15.86■□□□□ 0.13
PPP1CA-201ENST00000312989 NRG2O14511 850 aaPredicted RBP15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 KLRC4O43908 158 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 GARTP22102 1010 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 MCM4P33991 863 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 ALCAMQ13740 583 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 BRSK2Q8IWQ3 736 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 CCDC65Q8IXS2 484 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 GRAMD1CQ8IYS0 662 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 BEST2Q8NFU1 509 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 SLC7A14Q8TBB6 771 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 POMGNT1Q8WZA1 660 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 SAAL1Q96ER3 474 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 MAGEF1Q9HAY2 307 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 EPS15L1Q9UBC2 864 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 NUB1Q9Y5A7 615 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 PCDHB13Q9Y5F0 798 aa15.85■□□□□ 0.13
PPP1CA-201ENST00000312989 CITO14578 2027 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 TGFB1I1O43294 461 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 OAZ2O95190 189 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 SEC24AO95486 1093 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 HNRNPA1P09651 372 aaKnown RBP eCLIP15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 LILRA4P59901 499 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 NTHL1P78549 312 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 CUL4BQ13620 913 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 UNC13DQ70J99 1090 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 BMP8AQ7Z5Y6 402 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 ZNF461Q8TAF7 563 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 ZNF507Q8TCN5 953 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 SCFD1Q8WVM8 642 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 BLZF1Q9H2G9 400 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 LIMD1Q9UGP4 676 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 KCNH3Q9ULD8 1083 aa15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 TIMM13Q9Y5L4 95 aaPredicted RBP15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.84■□□□□ 0.13
PPP1CA-201ENST00000312989 PTPRJQ12913 1337 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 ARHGEF37A1IGU5 675 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 PFKFB1P16118 471 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 ASIC1P78348 528 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 SIGLEC14Q08ET2 396 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 TMEM132DQ14C87 1099 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 POSTNQ15063 836 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 OTOP3Q7RTS5 596 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 RTP3Q9BQQ7 232 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 FAM213AQ9BRX8 229 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 GZF1Q9H116 711 aaPredicted RBP15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 CRISPLD1Q9H336 500 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 SERTAD1Q9UHV2 236 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 EXOC7Q9UPT5 735 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 SORCS3Q9UPU3 1222 aa15.83■□□□□ 0.12
PPP1CA-201ENST00000312989 ANK1P16157 1881 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 GOLGA8IPA6NC78 632 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 TMEM221A6NGB7 291 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 GOLGA8JA6NMD2 632 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 M0R296 226 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 EIF3DO15371 548 aaKnown RBP eCLIP15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 CCL16O15467 120 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 SLFN14P0C7P3 912 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 ATF2P15336 505 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 CMA1P23946 247 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 BMT2Q1RMZ1 405 aa15.82■□□□□ 0.12
PPP1CA-201ENST00000312989 UVSSAQ2YD98 709 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms