RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 SHC3Q92529 594 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 APOBEC3GQ9HC16 384 aaKnown RBP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 DAAM1Q9Y4D1 1078 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 CEP83Q9Y592 693 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 SNX9Q9Y5X1 595 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 PROZP22891 400 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 CD52P31358 61 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 YWHAEP62258 255 aaKnown RBP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 DAAM2Q86T65 1068 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 ZNF653Q96CK0 615 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 CAPN6Q9Y6Q1 641 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 XPOTO43592 962 aaKnown RBP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 B4GALT4O60513 344 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 CABYRO75952 493 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 CXCR5P32302 372 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 NSFP46459 744 aaKnown RBP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 CDH8P55286 799 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 RNASE9P60153 205 aaKnown RBP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 RBP5P82980 135 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 LNX1Q8TBB1 728 aaPredicted RBP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 EPS8L1Q8TE68 723 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 TMEM174Q8WUU8 243 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRIM59-201ENST00000309784 UNC93B1Q9H1C4 597 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 TRPV6Q9H1D0 765 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 GOLPH3Q9H4A6 298 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 TAS2R14Q9NYV8 317 aa11.91□□□□□ -0.5
TRIM59-201ENST00000309784 ABLIM1O14639 778 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 GPR182O15218 404 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 ATMINO43313 823 aaPredicted RBP11.9□□□□□ -0.5
TRIM59-201ENST00000309784 PALMO75781 387 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 HOXA11P31270 313 aaPredicted RBP11.9□□□□□ -0.5
TRIM59-201ENST00000309784 GRM5P41594 1212 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 C2CD6Q53TS8 623 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 C10orf76Q5T2E6 689 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 PALB2Q86YC2 1186 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 C1orf127Q8N9H9 656 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 UBXN4Q92575 508 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 CISHQ9NSE2 258 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 SRGAP2O75044 1071 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 AXLP30530 894 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 NAA35Q5VZE5 725 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 SCARA3Q6AZY7 606 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 FAM228AQ86W67 206 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 FAM71AQ8IYT1 594 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 CPA5Q8WXQ8 436 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 PACSIN2Q9UNF0 486 aaPredicted RBP11.9□□□□□ -0.5
TRIM59-201ENST00000309784 PCDHB2Q9Y5E7 798 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 SAR1BQ9Y6B6 198 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 NCK2O43639 380 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 ASS1P00966 412 aaKnown RBP11.9□□□□□ -0.5
TRIM59-201ENST00000309784 ITGA4P13612 1032 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
TRIM59-201ENST00000309784 LPPQ93052 612 aa11.9□□□□□ -0.5
TRIM59-201ENST00000309784 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
TRIM59-201ENST00000309784 PQBP1O60828 265 aaKnown RBP11.89□□□□□ -0.51
TRIM59-201ENST00000309784 ATP1A1P05023 1023 aaKnown RBP11.89□□□□□ -0.51
TRIM59-201ENST00000309784 DPY19L2P1Q6NXN4 242 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 WNT8BQ93098 351 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 C18orf25Q96B23 403 aaPredicted RBP11.89□□□□□ -0.51
TRIM59-201ENST00000309784 GPR88Q9GZN0 384 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 THAP2Q9H0W7 228 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 RNF39Q9H2S5 420 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 ST7Q9NRC1 585 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 HYOU1Q9Y4L1 999 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 IPPQ9Y573 584 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 PMM2O15305 246 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
TRIM59-201ENST00000309784 MTFR1Q15390 333 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 ASTE1Q2TB18 679 aaPredicted RBP11.89□□□□□ -0.51
TRIM59-201ENST00000309784 PEX26Q7Z412 305 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 MYRIPQ8NFW9 859 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 OR6B3Q8NGW1 331 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 HEXIM2Q96MH2 286 aaKnown RBP11.89□□□□□ -0.51
TRIM59-201ENST00000309784 C11orf70Q9BRQ4 267 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 SENP6Q9GZR1 1112 aaPredicted RBP11.89□□□□□ -0.51
TRIM59-201ENST00000309784 PRMT2P55345 433 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 C15orf39Q6ZRI6 1047 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 SERINC5Q86VE9 423 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 GOLGA2P5Q9HBQ8 144 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 TUBGCP4Q9UGJ1 667 aa11.89□□□□□ -0.51
TRIM59-201ENST00000309784 MOXD2PA6NHM9 499 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 FAM189A1O60320 539 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 TFRCP02786 760 aaKnown RBP11.88□□□□□ -0.51
TRIM59-201ENST00000309784 ADAM17P78536 824 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 CDR2Q01850 454 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 PCBP1Q15365 356 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM59-201ENST00000309784 CD302Q8IX05 232 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 RABGGTAQ92696 567 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 PADI3Q9ULW8 664 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 UBQLN1Q9UMX0 589 aaKnown RBP11.88□□□□□ -0.51
TRIM59-201ENST00000309784 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 A0A1W2PQ45 241 aaPredicted RBP11.88□□□□□ -0.51
TRIM59-201ENST00000309784 A0A1W2PQY0 241 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 GJC1P36383 396 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 MESDQ14696 234 aa11.88□□□□□ -0.51
TRIM59-201ENST00000309784 GAD1Q99259 594 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms